DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha16-2 and OLI1

DIOPT Version :9

Sequence 1:NP_729707.1 Gene:Vha16-2 / 39282 FlyBaseID:FBgn0028668 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_009319.1 Gene:OLI1 / 854584 SGDID:S000007274 Length:76 Species:Saccharomyces cerevisiae


Alignment Length:66 Identity:21/66 - (31%)
Similarity:34/66 - (51%) Gaps:7/66 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 HLGAGLS-VGLPGLTAGVAIGIAGDAGVRGTAEQPRL----FVGMVLILIFAEVLALYGLIVAIY 153
            ::|||:| :||.|  ||:.|.|...|.:.|.:..|.:    |...:|....:|...|:.|:|:..
Yeast     9 YIGAGISTIGLLG--AGIGIAIVFAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLMVSFL 71

  Fly   154 L 154
            |
Yeast    72 L 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-2NP_729707.1 PRK06558 14..158 CDD:235830 21/66 (32%)
ATP-synt_C 15..120 CDD:294318 12/26 (46%)
ATP-synt_C 94..154 CDD:278563 20/64 (31%)
OLI1NP_009319.1 ATP-synt_Fo_c_ATP5G3 8..72 CDD:349422 20/64 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0636
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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