DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha16-2 and ATP6V0B

DIOPT Version :10

Sequence 1:NP_729707.1 Gene:Vha16-2 / 39282 FlyBaseID:FBgn0028668 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_001281262.1 Gene:ATP6V0B / 533 HGNCID:861 Length:261 Species:Homo sapiens


Alignment Length:159 Identity:48/159 - (30%)
Similarity:84/159 - (52%) Gaps:20/159 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 AFFLGCT--------GAAVAIIFTTLGASYGTAVSGVGIAKMAVNRPDMIMKAIIPVVMAGIIAI 69
            |:||..|        |..:||..:.:||::|..::|..|....|..|.:..|.::.::....:||
Human    38 AWFLTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAI 102

  Fly    70 YGLVVSVLIAGSIGDDYTMED-----------SYVHLGAGLSVGLPGLTAGVAIGIAGDAGVRGT 123
            ||::::::|: ::.:.::..|           .|...||||:|||..|..||.:||.|.......
Human   103 YGIIMAIVIS-NMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALAD 166

  Fly   124 AEQPRLFVGMVLILIFAEVLALYGLIVAI 152
            |:.|.|||.::::.||...:.|:|:||||
Human   167 AQNPSLFVKILIVEIFGSAIGLFGVIVAI 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-2NP_729707.1 PRK13469 15..120 CDD:469780 34/123 (28%)
ATP-synt_Vo_c_ATP6C_rpt2 91..155 CDD:349416 27/62 (44%)
ATP6V0BNP_001281262.1 ATP-synt_Vo_c_ATP6F_rpt1 49..111 CDD:349417 15/61 (25%)
ATP-synt_Vo_c_ATP6F_rpt2 133..197 CDD:349418 27/63 (43%)

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