DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha16-2 and ATP5MC2

DIOPT Version :9

Sequence 1:NP_729707.1 Gene:Vha16-2 / 39282 FlyBaseID:FBgn0028668 Length:158 Species:Drosophila melanogaster
Sequence 2:XP_016874949.1 Gene:ATP5MC2 / 517 HGNCID:842 Length:198 Species:Homo sapiens


Alignment Length:65 Identity:20/65 - (30%)
Similarity:33/65 - (50%) Gaps:7/65 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 LGAG-LSVGLPGLTAGVAIGIAGDAGVRGTAEQP----RLFVGMVLILIFAEVLALYGLIVAIYL 154
            :||| .:||:.|  :|..||....:.:.|.|..|    :||...:|....:|.:.|:.|:||..:
Human   132 IGAGAATVGVAG--SGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLI 194

  Fly   155  154
            Human   195  194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-2NP_729707.1 PRK06558 14..158 CDD:235830 20/65 (31%)
ATP-synt_C 15..120 CDD:294318 9/25 (36%)
ATP-synt_C 94..154 CDD:278563 20/63 (32%)
ATP5MC2XP_016874949.1 ATP9 124..198 CDD:164765 20/65 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0636
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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