DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Vha16-2 and atp6v0b

DIOPT Version :9

Sequence 1:	NP_729707.1	Gene:	Vha16-2 / 39282	FlyBaseID:	FBgn0028668	Length:	158	Species:	Drosophila melanogaster
Sequence 2:	NP_955855.2	Gene:	atp6v0b / 321724	ZFINID:	ZDB-GENE-030131-443	Length:	206	Species:	Danio rerio

Alignment Length:	165	Identity:	47/165 - (28%)
Similarity:	83/165 - (50%)	Gaps:	20/165 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly    13 AFFLGCT--------GAAVAIIFTTLGASYGTAVSGVGIAKMAVNRPDMIMKAIIPVVMAGIIAI 69
            |:||..|        |..:||..:.:||::|..::|..|....|..|.:..|.::.::....:||
Zfish    39 AWFLTETSPFMWANLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAI 103

  Fly    70 YGLVVSVLIAG-----------SIGDDYTMEDSYVHLGAGLSVGLPGLTAGVAIGIAGDAGVRGT 123
            ||::::::|:.           :||.. ..:..|...||||:||...|..|:.:||.|.......
Zfish   104 YGIIMAIVISNLAENFSGTTPETIGSK-NYQAGYSMFGAGLTVGFSNLFCGICVGIVGSGAALAD 167

  Fly   124 AEQPRLFVGMVLILIFAEVLALYGLIVAIYLYTKL 158
            |:...|||.::::.||...:.|:|:||||...:|:
Zfish   168 AQNANLFVRILIVEIFGSAIGLFGVIVAILQTSKV 202

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-2	NP_729707.1	PRK06558	14..158	CDD:235830	45/162 (28%)
		ATP-synt_C	15..120	CDD:294318	33/123 (27%)
		ATP-synt_C	94..154	CDD:278563	23/59 (39%)
atp6v0b	NP_955855.2	PRK08344	49..200	CDD:236246	42/151 (28%)
		ATP-synt_C	51..113	CDD:278563	15/61 (25%)
		ATP-synt_C	137..197	CDD:278563	22/59 (37%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0636
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810