Protein Alignment Vha16-2 and Atp5mc2

DIOPT Version :9

• Sequence 1: NP_729707.1
• Gene: Vha16-2 / 39282
• FlyBaseID: FBgn0028668
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_598240.1
• Gene: Atp5mc2 / 171082
• RGDID: 620051
• Length: 141
• Species: Rattus norvegicus
• Alignment Length: 117
• Identity: 28/117 - (23%)
• Similarity: 49/117 - (41%)
• Gaps: 23/117 - (19%)

  Fly    42 GIAKMAVNRPDMIMKAIIPVVMAGIIAIYGLVVSVLIAGSIGDDYTMEDSYVHLGAGLSVGLPGL 106
            |::.:||.||   :.::||             .......:|..|......::..||. :||:.|
  Rat    40 GLSCLAVRRP---LTSLIP-------------SRSFQTSAISRDIDTAAKFIGAGAA-TVGVAG- 86

  Fly   107 TAGVAIGIAGDAGVRGTAEQP----RLFVGMVLILIFAEVLALYGLIVAIYL 154
             :|..||....:.:.|.|..|    :||...:|....:|.:.|:.|:||..:
  Rat    87 -SGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLI 137

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-2	NP_729707.1	PRK06558	14..158	CDD:235830	28/117 (24%)
		ATP-synt_C	15..120	CDD:294318	17/77 (22%)
		ATP-synt_C	94..154	CDD:278563	19/63 (30%)
Atp5mc2	NP_598240.1	ATP9	67..141	CDD:164765	20/74 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0636
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900