DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fum3 and Fum2

DIOPT Version :9

Sequence 1:NP_001261710.1 Gene:Fum3 / 39281 FlyBaseID:FBgn0036162 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_727109.2 Gene:Fum2 / 31606 FlyBaseID:FBgn0029890 Length:503 Species:Drosophila melanogaster


Alignment Length:460 Identity:340/460 - (73%)
Similarity:395/460 - (85%) Gaps:0/460 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RQESDTLGPMEVPMDRYYGAQTMRCLINFRIGGEEERMPRQIIQAMGILKKAAAETNQEFGLDPK 74
            |.|.||.|.::||.|:.|||||||..:||.||...||||..:||||||||||.||.|:::|||.|
  Fly    43 RTEKDTFGELKVPADKLYGAQTMRSKLNFPIGDIGERMPMPVIQAMGILKKACAEVNKDYGLDGK 107

  Fly    75 LSTAISNAADDVISGKLYDEGHFPLPIWQTGSGTQSNMNSNEVIGNRAIELLGGRIGTKDPVHPN 139
            :|.|:|.|.|||||||||.:|||||.|||||||||:|||:||||.|.||:::||.:|:|.|||||
  Fly   108 VSDAVSCACDDVISGKLYKQGHFPLVIWQTGSGTQTNMNTNEVISNAAIKMMGGELGSKKPVHPN 172

  Fly   140 DHVNKSQSSNDTFPSAIHIAVATALTKDLRPAVTALRDSLQAKSNEWKDIIKIGRTHTQDAVPLT 204
            ||||||||||||||:||||:|...|.:.|.||||.|||:|::||:|:||||||||||..||||||
  Fly   173 DHVNKSQSSNDTFPTAIHISVGMELNERLVPAVTHLRDALKSKSDEFKDIIKIGRTHLMDAVPLT 237

  Fly   205 LGQEFSGYAQQLTNGLQRIDAVLPRVYQLALGGTAVGTGLNTRRGFAEKCVKRIAQLSGLPFVVA 269
            ||||||||.|||||||:||...|||||:|||||||||||||||:|||||..|||::|:.||||.|
  Fly   238 LGQEFSGYTQQLTNGLERIKGCLPRVYELALGGTAVGTGLNTRKGFAEKVAKRISELTCLPFVSA 302

  Fly   270 PNFFEALACRDAMVEVHGALNVLAVSLMKVTNDIRFLGSGPRCGLGELFLPENEPGSSIMPGKVN 334
            ||.|||||.|||||||||.||.:||||||:.||||.||||||||||||.||||||||||||||||
  Fly   303 PNKFEALAARDAMVEVHGVLNTIAVSLMKIANDIRLLGSGPRCGLGELMLPENEPGSSIMPGKVN 367

  Fly   335 PTQCEAMTMICAQVMGNHVAVSVGGANGHFELNVFKPLIASNVLRSIKLLADGCISFNCNCVKGI 399
            |||||:|||:|||||||.|||::||:||||||||||||:.|||||||:|||||.::|:.|||:|:
  Fly   368 PTQCESMTMLCAQVMGNQVAVTIGGSNGHFELNVFKPLVVSNVLRSIRLLADGSMTFSKNCVEGL 432

  Fly   400 KPNKEKLAKIVNESLMLVTALNPHIGYDKSAQIAKAAHKNGTTLKVEALNAGISEKDFNEWVRPE 464
            :.|||::.||:||||||||||||||||||:|.|||.||||.||||.|||..||:|:.|.|||.|:
  Fly   433 QANKERIDKIMNESLMLVTALNPHIGYDKAALIAKTAHKNKTTLKEEALKTGITEEQFKEWVNPK 497

  Fly   465 KMLGP 469
            :||||
  Fly   498 EMLGP 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fum3NP_001261710.1 fumC 8..469 CDD:234779 338/458 (74%)
Fumarase_classII 10..466 CDD:176465 336/455 (74%)
Fum2NP_727109.2 fumC 42..503 CDD:234779 340/460 (74%)
Fumarase_classII 43..499 CDD:176465 336/455 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471474
Domainoid 1 1.000 468 1.000 Domainoid score I90
eggNOG 1 0.900 - - E1_COG0114
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 648 1.000 Inparanoid score I173
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022919at2759
OrthoFinder 1 1.000 - - FOG0002459
OrthoInspector 1 1.000 - - otm42598
orthoMCL 1 0.900 - - OOG6_101016
Panther 1 1.100 - - P PTHR11444
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1641
1110.800

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