DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fum3 and FH

DIOPT Version :9

Sequence 1:NP_001261710.1 Gene:Fum3 / 39281 FlyBaseID:FBgn0036162 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_000134.2 Gene:FH / 2271 HGNCID:3700 Length:510 Species:Homo sapiens


Alignment Length:461 Identity:314/461 - (68%)
Similarity:374/461 - (81%) Gaps:3/461 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RQESDTLGPMEVPMDRYYGAQTMRCLINFRIGGEEERMPRQIIQAMGILKKAAAETNQEFGLDPK 74
            |.|.||.|.::||.|:||||||:|..:||:|||..||||..:|:|.||||:||||.||::|||||
Human    51 RIEYDTFGELKVPNDKYYGAQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQDYGLDPK 115

  Fly    75 LSTAISNAADDVISGKLYDEGHFPLPIWQTGSGTQSNMNSNEVIGNRAIELLGGRIGTKDPVHPN 139
            ::.||..|||:|..|||.|  ||||.:||||||||:|||.||||.|||||:|||.:|:|.|||||
Human   116 IANAIMKAADEVAEGKLND--HFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPN 178

  Fly   140 DHVNKSQSSNDTFPSAIHIAVATALTKDLRPAVTALRDSLQAKSNEWKDIIKIGRTHTQDAVPLT 204
            ||||||||||||||:|:|||.|..:.:.|.|.:..|.|:|.|||.|:..||||||||||||||||
Human   179 DHVNKSQSSNDTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSKEFAQIIKIGRTHTQDAVPLT 243

  Fly   205 LGQEFSGYAQQLTNGLQRIDAVLPRVYQLALGGTAVGTGLNTRRGFAEKCVKRIAQLSGLPFVVA 269
            ||||||||.||:...:.||.|.:||:|:||.||||||||||||.|||||...::|.|:|||||.|
Human   244 LGQEFSGYVQQVKYAMTRIKAAMPRIYELAAGGTAVGTGLNTRIGFAEKVAAKVAALTGLPFVTA 308

  Fly   270 PNFFEALACRDAMVEVHGALNVLAVSLMKVTNDIRFLGSGPRCGLGELFLPENEPGSSIMPGKVN 334
            ||.|||||..||:||:.||:|..|.||||:.|||||||||||.|||||.||||||||||||||||
Human   309 PNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILPENEPGSSIMPGKVN 373

  Fly   335 PTQCEAMTMICAQVMGNHVAVSVGGANGHFELNVFKPLIASNVLRSIKLLADGCISFNCNCVKGI 399
            |||||||||:.||||||||||:|||:|||||||||||::..|||.|.:||.|..:||..|||.||
Human   374 PTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGI 438

  Fly   400 KPNKEKLAKIVNESLMLVTALNPHIGYDKSAQIAKAAHKNGTTLKVEALNAG-ISEKDFNEWVRP 463
            :.|.|::.|::||||||||||||||||||:|:|||.|||||:|||..|:..| ::.:.|:|||:|
Human   439 QANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKP 503

  Fly   464 EKMLGP 469
            :.||||
Human   504 KDMLGP 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fum3NP_001261710.1 fumC 8..469 CDD:234779 312/459 (68%)
Fumarase_classII 10..466 CDD:176465 310/456 (68%)
FHNP_000134.2 fumC 49..510 CDD:234779 314/461 (68%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P05042 145..147 1/1 (100%)
Substrate binding (B site). /evidence=ECO:0000250|UniProtKB:P05042 176..179 2/2 (100%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P05042 186..188 1/1 (100%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P9WN93 371..373 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159912
Domainoid 1 1.000 520 1.000 Domainoid score I305
eggNOG 1 0.900 - - E1_COG0114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S145
OMA 1 1.010 - - QHG61095
OrthoDB 1 1.010 - - D1022919at2759
OrthoFinder 1 1.000 - - FOG0002459
OrthoInspector 1 1.000 - - otm40526
orthoMCL 1 0.900 - - OOG6_101016
Panther 1 1.100 - - O PTHR11444
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1641
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.670

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