DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fum3 and Fh1

DIOPT Version :9

Sequence 1:NP_001261710.1 Gene:Fum3 / 39281 FlyBaseID:FBgn0036162 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_034339.2 Gene:Fh1 / 14194 MGIID:95530 Length:507 Species:Mus musculus


Alignment Length:461 Identity:316/461 - (68%)
Similarity:375/461 - (81%) Gaps:3/461 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RQESDTLGPMEVPMDRYYGAQTMRCLINFRIGGEEERMPRQIIQAMGILKKAAAETNQEFGLDPK 74
            |.|.||.|.::||.|:||||||:|..:||:|||..||||..:|||.||||:||||.|||:|||||
Mouse    48 RVEFDTFGELKVPTDKYYGAQTVRSTMNFKIGGATERMPIPVIQAFGILKRAAAEVNQEYGLDPK 112

  Fly    75 LSTAISNAADDVISGKLYDEGHFPLPIWQTGSGTQSNMNSNEVIGNRAIELLGGRIGTKDPVHPN 139
            :::||..|||:|..|||.|  ||||.:||||||||:|||.||||.|||||:|||.:|:|.|||||
Mouse   113 IASAIMKAADEVAEGKLND--HFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKKPVHPN 175

  Fly   140 DHVNKSQSSNDTFPSAIHIAVATALTKDLRPAVTALRDSLQAKSNEWKDIIKIGRTHTQDAVPLT 204
            ||||||||||||||:|:|||.|..:.|.|.|.:..|.|:|.|||.|:..:|||||||||||||||
Mouse   176 DHVNKSQSSNDTFPTAMHIAAAVEVHKVLLPGLQKLHDALSAKSKEFAQVIKIGRTHTQDAVPLT 240

  Fly   205 LGQEFSGYAQQLTNGLQRIDAVLPRVYQLALGGTAVGTGLNTRRGFAEKCVKRIAQLSGLPFVVA 269
            ||||||||.||:...:.||.|.:||:|:||.||||||||||||.|||||...::|.|:|||||.|
Mouse   241 LGQEFSGYVQQVQYAMVRIKAAMPRIYELAAGGTAVGTGLNTRIGFAEKVAAKVAALTGLPFVTA 305

  Fly   270 PNFFEALACRDAMVEVHGALNVLAVSLMKVTNDIRFLGSGPRCGLGELFLPENEPGSSIMPGKVN 334
            ||.|||||..||:||:.||:|..|.||||:.|||||||||||.|||||.||||||||||||||||
Mouse   306 PNKFEALAAHDALVELSGAMNTAACSLMKIANDIRFLGSGPRSGLGELILPENEPGSSIMPGKVN 370

  Fly   335 PTQCEAMTMICAQVMGNHVAVSVGGANGHFELNVFKPLIASNVLRSIKLLADGCISFNCNCVKGI 399
            |||||||||:.||||||||||:|||:|||||||||||::..|||.|.:||.|..:||..|||.||
Mouse   371 PTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTDNCVVGI 435

  Fly   400 KPNKEKLAKIVNESLMLVTALNPHIGYDKSAQIAKAAHKNGTTLKVEALNAG-ISEKDFNEWVRP 463
            :.|.|::.|::||||||||||||||||||:|:|||.|||||:|||..|:..| ::.:.|:|||:|
Mouse   436 QANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKP 500

  Fly   464 EKMLGP 469
            :.||||
Mouse   501 KDMLGP 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fum3NP_001261710.1 fumC 8..469 CDD:234779 314/459 (68%)
Fumarase_classII 10..466 CDD:176465 312/456 (68%)
Fh1NP_034339.2 fumC 46..507 CDD:234779 316/461 (69%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P05042 142..144 1/1 (100%)
Substrate binding (B site). /evidence=ECO:0000250|UniProtKB:P05042 173..176 2/2 (100%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P05042 183..185 1/1 (100%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P9WN93 368..370 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850282
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S145
OMA 1 1.010 - - QHG61095
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002459
OrthoInspector 1 1.000 - - otm42598
orthoMCL 1 0.900 - - OOG6_101016
Panther 1 1.100 - - O PTHR11444
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1641
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.660

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