DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11726 and NAM8

DIOPT Version :10

Sequence 1:NP_648461.1 Gene:CG11726 / 39275 FlyBaseID:FBgn0036156 Length:291 Species:Drosophila melanogaster
Sequence 2:NP_011954.1 Gene:NAM8 / 856486 SGDID:S000001128 Length:523 Species:Saccharomyces cerevisiae


Alignment Length:157 Identity:37/157 - (23%)
Similarity:69/157 - (43%) Gaps:35/157 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 VSNLPMECTEGELRKVF----TSFSIRSLTIPKKGKRPKGFAYVEM-DSREDLVRLLKMDKLKCR 148
            |.:|....||.:|.::|    .|.|...:...:.....||:.:|:. :|.|..:.|.:|..:...
Yeast   167 VGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLN 231

  Fly   149 GRCLMAKIGQLPPEPPTKAAGDGFSLFTCSGRQFDINSSH-YSASVSDLS--TIDSPISARNSPF 210
            ||.:  |:|      ||            ||:|..::.:: |:.|.|.|:  .:||...::...|
Yeast   232 GRAI--KVG------PT------------SGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSF 276

  Fly   211 PSESESSF-FGRDN------PIKRIPS 230
            .|...::. |.|::      |:::.||
Yeast   277 LSNGNNNMGFKRNHMSQFIYPVQQQPS 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11726NP_648461.1 RRM_SF 83..150 CDD:473069 15/65 (23%)
NAM8NP_011954.1 RRM1_NGR1_NAM8_like 55..144 CDD:410023
RRM2_SECp43_like 162..241 CDD:409781 21/93 (23%)
RRM3_NGR1_NAM8_like 312..383 CDD:409782
Blue background indicates that the domain is not in the aligned region.

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