DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11726 and ncl

DIOPT Version :10

Sequence 1:NP_648461.1 Gene:CG11726 / 39275 FlyBaseID:FBgn0036156 Length:291 Species:Drosophila melanogaster
Sequence 2:NP_001070120.3 Gene:ncl / 767714 ZFINID:ZDB-GENE-030131-6986 Length:704 Species:Danio rerio


Alignment Length:265 Identity:57/265 - (21%)
Similarity:92/265 - (34%) Gaps:82/265 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FKLPPVSSSSVSSVSGSESGQGLEDMLHVTKVRTSQVDNAELFMYGDGPKKSNSDLQKKVSTPDP 75
            ||...::..::....||:. ||...::..|..::.|        .|.|...::.           
Zfish   420 FKTEAIAEKALEEAQGSDV-QGRSIIVDFTGDKSRQ--------GGRGAPSASK----------- 464

  Fly    76 EEEVSMEPPFVALVSNLPMECTEGELRKVF-TSFSIRSLTIPKKGKRPKGFAYVEMDSREDLVRL 139
                      |.:|:||....:|..|:.|| .:.|||   ||:...||||:|:||.::.||....
Zfish   465 ----------VLVVNNLAFSASEDSLQSVFEKAVSIR---IPQNNGRPKGYAFVEFENVEDSKEA 516

  Fly   140 LK-MDKLKCRGRCLMAKIGQLPPE---------PPTKAAGDGFSLFTCSGRQFDINSSHYSASVS 194
            |: .:.....||.:..:..|...|         .|||      :||. .|...|....    ::.
Zfish   517 LENCNNTDIEGRSIRLEYSQNDRERGGGGRGNSGPTK------TLFV-KGLSDDTTDQ----TLK 570

  Fly   195 DLSTIDSPISARNSPFPSESESSFFGRDNPIKRIPSSTEEVERRMQIRLQKLAEFENSESERIKS 259
            |  :.|..|:||.:.......|..||                         ..:|:|.:..:...
Zfish   571 D--SFDGAIAARIATDRDTGSSKGFG-------------------------FVDFDNEQDCKAAK 608

  Fly   260 ECEDD 264
            |..||
Zfish   609 EAMDD 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11726NP_648461.1 RRM_SF 83..150 CDD:473069 23/68 (34%)
nclNP_001070120.3 None

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