DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11726 and zcrb1

DIOPT Version :10

Sequence 1:NP_648461.1 Gene:CG11726 / 39275 FlyBaseID:FBgn0036156 Length:291 Species:Drosophila melanogaster
Sequence 2:NP_001017589.2 Gene:zcrb1 / 550251 ZFINID:ZDB-GENE-041210-114 Length:218 Species:Danio rerio


Alignment Length:219 Identity:46/219 - (21%)
Similarity:83/219 - (37%) Gaps:52/219 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 VSNLPMECTEGELRKVFTSF-SIRSLTI--PKKGKRPKGFAYVEMDSREDLVRLLK-MDKLKCRG 149
            |||:|...|..::.|:.:.: .:..:||  .|..:..||.|:|....||......: ::..:..|
Zfish    14 VSNIPFSLTNSDMHKLCSKYGKVVKVTIVKDKHTRMSKGVAFVLFLDRESAYNCSRSLNNKQLFG 78

  Fly   150 RCLMAKIGQLPPEPPTKAAGDGFSLFTCSGRQFDINSSHYSASVSDLSTIDSPISARNSPFPSES 214
            |.:.|.|          |..:|.:......|.:...|..|...                   .|.
Zfish    79 RMVKASI----------AIDNGRAAEFIRKRNYTDKSKCYECG-------------------EEG 114

  Fly   215 ESSFFGRDNPI-KRIPSSTEEVERRMQIRLQKLAEFENSESERIKSECEDDPDAFMSWSDAL--- 275
            ..|:....|.: :|.|...:|.:::.:::..:..|.|:||.|      .:|| |..|.|.|:   
Zfish   115 HLSYACPKNLLGEREPPPKKEKKKKKKVQQPEEVEPEDSEEE------GEDP-ALDSLSQAIAFQ 172

  Fly   276 ------DEIRKSET--DSSNHTES 291
                  :|.|:.:.  |:|..:.|
Zfish   173 QARIEEEEKRRKQAAEDASQASTS 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11726NP_648461.1 RRM_SF 83..150 CDD:473069 15/64 (23%)
zcrb1NP_001017589.2 RRM_ZCRB1 9..84 CDD:409827 17/69 (25%)
PTZ00368 107..>126 CDD:173561 4/37 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..218 20/82 (24%)

Return to query results.
Submit another query.