DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11726 and CG10466

DIOPT Version :10

Sequence 1:NP_648461.1 Gene:CG11726 / 39275 FlyBaseID:FBgn0036156 Length:291 Species:Drosophila melanogaster
Sequence 2:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster


Alignment Length:139 Identity:32/139 - (23%)
Similarity:57/139 - (41%) Gaps:30/139 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LEDMLHVTKVRTSQVDNAELFMYGDGPKKSNSDLQKKVSTPDPEEEVSMEPPFVALVSNLPMECT 97
            |.:|.:|.|:...::.:        |.|||..|:.|..:.              ..|:..|...|
  Fly     4 LTNMKNVLKLSEHELQH--------GGKKSWHDMYKDSAW--------------IFVAGFPYTLT 46

  Fly    98 EGELRKVFTSF----SIRSLTIPKKGKRPKGFAYV-EMDSREDLVRLLKMDKLKCRGRCLMAKIG 157
            ||:|..||:.:    :|..:...|.|| .|||.:: ..|.|..::.:..::.:|...|.|  ::.
  Fly    47 EGDLVCVFSQYGEVVNINLIRDSKTGK-SKGFCFLCYEDQRSTVLAVDNLNGIKILDRTL--RVD 108

  Fly   158 QLPPEPPTK 166
            .:....|.|
  Fly   109 HVADYKPPK 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11726NP_648461.1 RRM_SF 83..150 CDD:473069 18/71 (25%)
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 23/104 (22%)

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