DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG11726 and Rbm34

DIOPT Version :9

Sequence 1:	NP_648461.1	Gene:	CG11726 / 39275	FlyBaseID:	FBgn0036156	Length:	291	Species:	Drosophila melanogaster
Sequence 2:	NP_001014037.1	Gene:	Rbm34 / 307956	RGDID:	1310161	Length:	428	Species:	Rattus norvegicus

Alignment Length:	156	Identity:	32/156 - (20%)
Similarity:	62/156 - (39%)	Gaps:	38/156 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 MSKSSRSFKLPPVSSSSVSSVSGSESGQGLEDMLHVTKVRTSQVDNAELFMYGDGPKKS------ 62
            :.:.:|..|:..:|.:. ..::..||.....|:   .::|..|         |.|.::|
  Rat    97 LQEPARKVKVKKLSDAD-KRLANRESALANADL---EEIRQDQ---------GQGRRRSQSRGKV 148

  Fly    63 ------------NSDLQKKVSTP-DPEEEVSMEPPFVALVSNLPMECTEGELRKVFTSF----SI 110
                        |.|.:::...| :|||| .::......|.|||:.|.:.:|:..|..:    |:
  Rat   149 TDGEALDVALSLNEDGRQRTKVPLNPEEE-RLKNERTVFVGNLPVTCNKKKLKSFFKEYGQVESV 212

  Fly   111 RSLTI-PKKGKRPKGFAYVEMDSRED 135
            |..:: |.:|...|..|.::.....|
  Rat   213 RFRSVMPAEGTLSKKLAAIKRKFHPD 238

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG11726	NP_648461.1	RRM_SF	84..156	CDD:302621	14/57 (25%)
Rbm34	NP_001014037.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1..106		1/8 (13%)
		RRM	73..364	CDD:223796	32/156 (21%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	127..152		6/36 (17%)
		RRM1_RBM34	183..274	CDD:240840	14/56 (25%)
		RRM2_RBM34	286..358	CDD:240841
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	361..428
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23236
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010