DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11726 and Eif4h

DIOPT Version :10

Sequence 1:NP_648461.1 Gene:CG11726 / 39275 FlyBaseID:FBgn0036156 Length:291 Species:Drosophila melanogaster
Sequence 2:NP_291039.1 Gene:Eif4h / 22384 MGIID:1341822 Length:248 Species:Mus musculus


Alignment Length:203 Identity:50/203 - (24%)
Similarity:77/203 - (37%) Gaps:47/203 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 EEEVSMEPPFVALVSNLPMECTEGELRKVFTSFSIRSLTI--PKKGKRPKGFAYVEMDSREDLVR 138
            ::|:..|||:.|.|.|||....:|::..:|...||||:.:  .|...:.|||.|||.|..:.|..
Mouse    33 QKELPTEPPYTAYVGNLPFNTVQGDIDAIFKDLSIRSVRLVRDKDTDKFKGFCYVEFDEVDSLKE 97

  Fly   139 LLKMDKLKCRGRCLMAKIGQLPPEPPTKAAGDGFSLFTCSG-----------------RQFDINS 186
            .|..|......|.|...|.:     ..|....||. |...|                 .:.|.||
Mouse    98 ALTYDGALLGDRSLRVDIAE-----GRKQDKGGFG-FRKGGPDDRGMGGSRESRGGWDSRDDFNS 156

  Fly   187 SHYSASVSDLSTIDSPISARNSPFPSESES-----SFFGRDNPIK------RIPSSTEEVER-RM 239
            .:.          |..:..|....|.:..:     |.|....|::      |.|:..|..:| |:
Mouse   157 GYR----------DDFLGGRGGSRPGDRRAGPPMGSRFRDGPPLRGSNMDFREPTEEERAQRPRL 211

  Fly   240 QIRLQKLA 247
            |::.:.:|
Mouse   212 QLKPRTVA 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11726NP_648461.1 RRM_SF 83..150 CDD:473069 24/68 (35%)
Eif4hNP_291039.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 2/7 (29%)
RRM_eIF4H 37..120 CDD:409835 28/87 (32%)
SF-CC1 <40..>227 CDD:273721 48/196 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..248 20/109 (18%)

Return to query results.
Submit another query.