DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11726 and EIF4B

DIOPT Version :9

Sequence 1:NP_648461.1 Gene:CG11726 / 39275 FlyBaseID:FBgn0036156 Length:291 Species:Drosophila melanogaster
Sequence 2:NP_001287750.1 Gene:EIF4B / 1975 HGNCID:3285 Length:616 Species:Homo sapiens


Alignment Length:416 Identity:68/416 - (16%)
Similarity:114/416 - (27%) Gaps:193/416 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FKLPPVSSSSVSSVSGSESGQGLEDMLHVTKVRTSQVDNAELFMYGDGPKKSNSDLQKKVSTPDP 75
            ::.||:..|.:.:...:              .|...:|.:.|      ||               
Human    63 YRAPPIDRSILPTAPRA--------------AREPNIDRSRL------PK--------------- 92

  Fly    76 EEEVSMEPPFVALVSNLPMECTEGELRKVFTSFSIRSLTIPKKGKRP---KGFAYVEMDSREDLV 137
                  .||:.|.:.|||.:.||..:::.|...:|.::.:|::...|   |||.|.|.:..:.|:
Human    93 ------SPPYTAFLGNLPYDVTEESIKEFFRGLNISAVRLPREPSNPERLKGFGYAEFEDLDSLL 151

  Fly   138 RLLKMDKLKCRGRCLMAKIG--------------------------------------QLPPEPP 164
            ..|.:::.....|.:...:.                                      ..||...
Human   152 SALSLNEESLGNRRIRVDVADQAQDKDRDDRSFGRDRNRDSDKTDTDWRARPATDSFDDYPPRRG 216

  Fly   165 TKAAGD----------------------------------------------GFSLFTCSGR--- 180
            ..:.||                                              |:.....|||   
Human   217 DDSFGDKYRDRYDSDRYRDGYRDGYRDGPRRDMDRYGGRDRYDDRGSRDYDRGYDSRIGSGRRAF 281

  Fly   181 -------------------QFDINSSHYSASVSDLSTIDSPISARNSP-----------FPSESE 215
                               ::|.......:|..|.|..|.....|..|           .|.|.:
Human   282 GSGYRRDDDYRGGGDRYEDRYDRRDDRSWSSRDDYSRDDYRRDDRGPPQRPKLNLKPRSTPKEDD 346

  Fly   216 S-----------SFFGRDNPIKRIPSSTEEVERRMQIRLQKLAEFENSESERIKSECEDDP---- 265
            |           |.||...|:     .|...||.::.||||       |.|:::.:. |:|    
Human   347 SSASTSQSTRAASIFGGAKPV-----DTAAREREVEERLQK-------EQEKLQRQL-DEPKLER 398

  Fly   266 ---DAFMSW-SDALDEIRKSETDSSN 287
               :...|| |:...|..:|.|.|.:
Human   399 RPRERHPSWRSEETQERERSRTGSES 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11726NP_648461.1 RRM_SF 84..156 CDD:302621 19/74 (26%)
EIF4BNP_001287750.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..93 8/67 (12%)
RRM <83..>190 CDD:223796 24/133 (18%)
RRM_eIF4B 95..171 CDD:240848 19/75 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1530583at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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