DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6163 and brwl

DIOPT Version :10

Sequence 1:NP_648460.1 Gene:CG6163 / 39274 FlyBaseID:FBgn0036155 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_609298.1 Gene:brwl / 34275 FlyBaseID:FBgn0032130 Length:435 Species:Drosophila melanogaster


Alignment Length:296 Identity:51/296 - (17%)
Similarity:81/296 - (27%) Gaps:134/296 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 RIIDAIKTRPSL-------WAGRQRSEKGQGQSRTSAVWKEAAMEMGLTPTLMQTRWSIIK---Q 280
            |.::.::|...|       :..|...||         .|...:.|...:....:.||..::   .
  Fly    60 RFVNLVRTHKCLYDKKVPEYRNRDNQEK---------AWVLISKETRESVIHCKERWRNLRACLS 115

  Fly   281 RYVDELQKERHAQYSHQSFRSTWEHFDRMSFMREILLKKVDEREQTREQIQEIVSEQQH--HQQT 343
            ||:   :::..::..|:.:..| ||   |:|:...|....:..|............|||  ||..
  Fly   116 RYI---KQQSGSEPQHKPYYLT-EH---MAFLLPFLKSSRNSLEGNNSLATLYQMSQQHLQHQPF 173

  Fly   344 QHHPSQHL---HHY--------------------------------------------------- 354
            ..||:.|.   |.|                                                   
  Fly   174 LLHPALHATEEHKYCANTSINNNNNNNDVHNGESMEVLEMKYSISEKDDEETIDAFDPAVTNTLG 238

  Fly   355 --------------------RPPQ-------------PPAGLVE-----------HAQDMPIGLV 375
                                .|.:             |...|.|           |....|:   
  Fly   239 MNRTSSTPTRSSALQGGGGNSPARSDTASADSMKNFIPDVQLAETGSQLIYSDGGHGTPPPL--- 300

  Fly   376 QHHHQEGH-HP-TLAM-HHPQHSQP-IRRRVKHESD 407
             |:|...| || ||:| |||...:| ..:|:|.|.:
  Fly   301 -HYHPHSHPHPLTLSMDHHPASYEPGSTKRIKTECE 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6163NP_648460.1 MADF 12..98 CDD:214738
MADF 226..316 CDD:214738 18/99 (18%)
brwlNP_609298.1 MADF 60..145 CDD:214738 18/100 (18%)
BESS 356..389 CDD:460758
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.