DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir68a and GluRIB

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_001261621.2 Gene:GluRIB / 44484 FlyBaseID:FBgn0264000 Length:1182 Species:Drosophila melanogaster


Alignment Length:893 Identity:167/893 - (18%)
Similarity:296/893 - (33%) Gaps:314/893 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 QKILWVANVKRCFAV-ITDDLHYPIYDRIFFESVGRRVIPFF-----VMRTNESDDLQRP---SR 97
            :|:|..::....||: :..|.|..|.|.|.|.. .|::|..:     ::|..:.....||   |.
  Fly   137 EKVLTPSSGFLDFALSMRPDYHQAIIDTIQFYG-WRKIIYLYDSHDGLLRLQQIYQGLRPGNESF 200

  Fly    98 QVELFVKAIKSSDCELNVITILNGWQVQRFLGYIYDNRSL------NMQKKFVLLH--DLRL--- 151
            |||| ||.|.:....:..:..|.  |:.||     :|:.:      .|.|:.::.|  ||||   
  Fly   201 QVEL-VKRISNVSMAIEFLHTLE--QIGRF-----ENKHIVLDCPTEMAKQILIQHVRDLRLGRR 257

  Fly   152 --------------FESDMIHLWSVFI-------------------------------------- 164
                          :||::|...::.|                                      
  Fly   258 TYHYLLSGLVMDDRWESEIIEFGAINITGFRIVDTNRRLVREFYDSWKRLDPQMSVGAGRESISA 322

  Fly   165 ------DAIFLKRQLDNK---------------------------------YTISTI-------- 182
                  ||:|:..:..||                                 |..|..        
  Fly   323 QAALMYDAVFVLVEAFNKILRKKPDQFRNNVQRRSQTLMVAQAAASTSSDGYNYSASGGGGGNGG 387

  Fly   183 ---AFPGILSG-----------VLVMKNIAN-WELG------------KGLNGRILFADKTSNLF 220
               .|.|..||           ....|...| ||.|            :||.|.|.|.|....:.
  Fly   388 AGGGFAGSDSGGSGGMASRALDCNTAKGWVNAWEHGDKISRYLRKVEIEGLTGDIKFNDDGRRVN 452

  Fly   221 GTSLPVAISEHVPMVLWANATKSFQGVEVEIMNALGKALNFKP-VYYKPNQTENMDWTELDGG-- 282
            .|...|.::.:..||..|...   ....::.:||  |.:..:| |.::.|:|..:. |.|:..  
  Fly   453 YTLHVVEMTVNSAMVKVAEWN---DDAGLQPLNA--KYVRLRPHVEFEKNRTYIVT-TVLEEPYI 511

  Fly   283 --ASVAYGS---GNP--DGYAQN---------GTHIDSMLV-------DEVAAH----------- 313
              ..||:|.   ||.  :||.::         |.:.:..||       ::.:||           
  Fly   512 MLKQVAFGEKLHGNNRFEGYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDGMVGELV 576

  Fly   314 --SARFAIGDLHLFQVYLKLVELSAPHNFECLTFL--TPESSTDNSWQTFILPFSAGMWVGVLLS 374
              .|..||..:.:.....::::.|.|.....::.:  .|...|...: :|:.|.|..:||.|:.|
  Fly   577 RKEADIAIAAMTITAERERVIDFSKPFMSLGISIMIKKPVKQTPGVF-SFMNPLSQEIWVSVIFS 640

  Fly   375 LFVVGTVFYAISFLNAIINGNVSSEFFRCL--RPNRNVPMDPKIYRR------------------ 419
            ...|..|.:.:|        ..|...:|.:  :|.::...||..:..                  
  Fly   641 YIGVSIVLFFVS--------RFSPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPA 697

  Fly   420 ---------------ISFRIAISRYRSSKGDRMPRDLFDGYTNCILLTYSM----------LLYV 459
                           .:.:.|:|......|         |.::.::..:|:          .:..
  Fly   698 PPGPPTPGAQTAAGAAALQAALSAGSPGSG---------GSSSAVVNEFSVWNSFWFSLAAFMQQ 753

  Fly   460 ALPRMPRNWPLRVLTGWYWIYCILLVATYRASFTAILANPAARVTIDTLEDL-LRSHIPPST--- 520
            .....||:...|:....::.:.::|:::|.|:..|.|........|::.||| :::.:...|   
  Fly   754 GCDLSPRSVSGRIAAASWFFFTLILISSYTANLAAFLTVERMVTPINSPEDLAMQTEVQYGTLLH 818

  Fly   521 GATENRQFFLEANDEVARKVGEKM----EVF--GYSDDLTS-RIAKGQCAYY----DNEFY---- 570
            |:|.:  ||..:...:..|:.|.|    .||  .|.:.:.. |.:||:.|..    .||:.    
  Fly   819 GSTWD--FFRRSQIGLHNKMWEYMNSRKHVFVPTYDEGIKRVRNSKGKYALLVESPKNEYVNARE 881

  Fly   571 ----LRYLRVADESGSALHIMKECVLYMPVVLAMEKNSALKPRVDASIQHLAEGG----LIAKWL 627
                ::..|..|..|..              :|....||||..::.::..|.|.|    |..||.
  Fly   882 PCDTMKVGRNLDTKGFG--------------IATPLGSALKDPINLAVLTLKENGELIKLRNKWW 932

  Fly   628 KDAIE---HLPAEALAQQEALMNIQKFWSSFVALLIGYVISMLTLLAE 672
            .:..|   |...|....:.:|.|:.   ..|..|:.|.::|:...:.|
  Fly   933 YEKAECSTHKDGETSHSELSLSNVA---GIFYILIGGLLVSVFVAILE 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 53/271 (20%)
GluRIBNP_001261621.2 PBP1_iGluR_AMPA 43..478 CDD:107375 66/352 (19%)
ANF_receptor 55..461 CDD:279440 63/332 (19%)
PBP2_iGluR_AMPA 497..938 CDD:270433 86/475 (18%)
Lig_chan 632..967 CDD:278489 67/370 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462516
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.