DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68a and GluRIID

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_651982.1 Gene:GluRIID / 44483 FlyBaseID:FBgn0028422 Length:902 Species:Drosophila melanogaster


Alignment Length:615 Identity:119/615 - (19%)
Similarity:233/615 - (37%) Gaps:164/615 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 FLGYIYDNRSLNMQKKFVLLHDLRLFESDMIHLWSVFIDAIFLKRQLDNKYTISTIAFPGILSGV 191
            |..|:   |||.:::|.:                   ...|:.:..:...:|...|...  .||:
  Fly   344 FRNYM---RSLEIKEKTI-------------------TGRIYFEGNVRKGFTFDVIELQ--TSGL 384

  Fly   192 LVMKNIANWELGKGLNGR-----ILFAD-----KTSNLFGTSLPVAISEHVPMV-----LWANAT 241
            :   .:..||.||....:     :.|.|     ..:..|...:.||...:..:|     |..|  
  Fly   385 V---KVGTWEEGKDFEFQRPPQAVNFNDIDDGSLVNKTFIVLISVATKPYASLVESIDTLIGN-- 444

  Fly   242 KSFQGVEVEIMNALGKALNFKPVYYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSML 306
            ..|||..|:::..|...|.|             ::|..|||..  |||.|      ..|:..|.:
  Fly   445 NQFQGYGVDLIKELADKLGF-------------NFTFRDGGND--YGSFN------KTTNSTSGM 488

  Fly   307 VDEVAAHSARFAIGDLHLFQVYLKLVELSAPH-NFE-CLTFLTPESSTDNSWQTFILPFSAGMWV 369
            :.|:....|..||.||.:.....::::.|.|. |.. .:.::.|:.:....: :|:.|||:.:|:
  Fly   489 LKEIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQKAPPALF-SFMDPFSSEVWL 552

  Fly   370 GVLLSLFVVGTVFYAISFLNAIINGNVSSEFFRCLRPNRNVPMDPKIYRRISFRIAISRYRSSKG 434
            .:.::...|...|:.|..|:.|...|.    :.|:..                            
  Fly   553 YLGIAYLGVSLCFFIIGRLSPIEWDNP----YPCIEE---------------------------- 585

  Fly   435 DRMPRDLFDGYT--NCILLTYSMLLYVALPRMPRNWPLRVLTGWYWIYCILLVATYRASFTAILA 497
               |.:|.:.:|  |.:..|...||.......|:....|.::..:|.:.:::|::|.|:..|.|.
  Fly   586 ---PEELENQFTINNSLWFTTGALLQQGSEIAPKALSTRTISAIWWFFTLIMVSSYTANLAAFLT 647

  Fly   498 --NPAARVTIDTLEDLLRS-----HIPPSTGATENRQFFLEANDEVARKVGEKME-----VFGYS 550
              ||.:  .|::::||..:     :....||:|.|  ||..:.:.:..|:.|.:.     :...:
  Fly   648 IENPTS--PINSVKDLADNKDDVQYGAKRTGSTRN--FFSTSEEPIYIKMNEYLNAHPEMLMENN 708

  Fly   551 DDLTSRIAKGQCAYYDNEFYLRYLRVADESGSALHIMKECVLYM---PV-----VLAMEKNSALK 607
            .....::..|          .:|..:.:.:....:.::||.|..   |:     .:||.||...:
  Fly   709 QQGVDKVKSG----------TKYAFLMESTSIEFNTVRECNLTKVGDPLDEKGYGIAMVKNWPYR 763

  Fly   608 PRVDASIQHLAEGGLIA----KWLKD---------AIEHLPAEALAQQEALMNIQKFWSSFVALL 659
            .:.:.::..|.|.|::|    ||..:         :.:..|:|        :.:......:|.|:
  Fly   764 DKFNKALLELQEQGVLARLKNKWWNEVGAGVCSAKSDDDGPSE--------LGVDNLSGIYVVLV 820

  Fly   660 IGYVIS-MLTLLAERWHFKHIVMKHPMYDV 688
            ||.:|| ::::|.  |.: .:..|...|:|
  Fly   821 IGSIISIIISILC--WCY-FVYKKAKNYEV 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 48/266 (18%)
GluRIIDNP_651982.1 PBP1_iGluR_Kainate 35..397 CDD:107377 15/79 (19%)
ANF_receptor 46..380 CDD:279440 9/57 (16%)
PBP2_iGluR_Kainate 417..788 CDD:270432 89/443 (20%)
Lig_chan 549..819 CDD:278489 55/326 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462706
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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