DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir68a and Ir84a

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster


Alignment Length:609 Identity:109/609 - (17%)
Similarity:197/609 - (32%) Gaps:191/609 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 SEHVPMVLWANATKSFQGVEVEIMNALGKALNFKPVYYKPNQTENMDWTELDGGASVA------- 286
            |||:..||......:....::|....|  ..|::..:|:|..:.|.:.....|....|       
  Fly    44 SEHLSHVLVVRGDDADGDWKIECHQKL--LANYRVQFYRPEMSANFEDLMFYGSPRTAVLVLNSE 106

  Fly   287 --------YGSGNPDGYAQN-------GTHIDSM----LVDEVAAHSARFAIGDLHLFQVYLKLV 332
                    :|..:..||..|       |:..:|:    |:|::.:........|:        .|
  Fly   107 HVLVRRQVFGVASEAGYFNNSLAWFILGSGRESLPVEQLIDQLLSGYRMGIDADI--------TV 163

  Fly   333 ELSAPHNFECLTF----LTPESSTDNSWQTFILPFSAGMWV--------GVLLSLFVVGTVFYAI 385
            .|..|.|...|.:    ::.:::|.      ::....|:|.        |...:.:|:    ...
  Fly   164 ALRGPDNASMLFYDVYRISRQANTP------LIIEKKGLWTHSGGYQKFGNFKNTWVI----RRR 218

  Fly   386 SFLN-AIINGNVSSE------FFRCLRPNRNV----PMDPKIY-------RRISFRIAIS----- 427
            :||| .:|...|.:|      ....|..::.:    ||..|.|       |..:..:|||     
  Fly   219 NFLNVTLIGSTVLTEKPPGFGDMEYLADDKQLQQLDPMQRKTYQLFQLVERMFNLSLAISLTDKW 283

  Fly   428 --------------RYRSSKGD-------------------------------RMPRD------L 441
                          :..|.:.|                               |.||.      .
  Fly   284 GELLDNGSWSGVMGQVTSREADFAVCPIRFVLDRQPYVQYSAVLHTQNIHFLFRHPRRSHIKNIF 348

  Fly   442 FDGYTN----CILL-----TYSMLLYVALPRMPRNWPLRVLTGWY-------------------- 477
            |:..:|    |:|.     |..:|.:|.|.||..|...|....|:                    
  Fly   349 FEPLSNQVWWCVLALVTGSTILLLFHVRLERMLSNMENRFSFVWFTMLETYLQQGPANEIFRLFS 413

  Fly   478 --------WIYCILLVATYRASFTAILANPAARVTIDTLEDLLRSHIP-PSTGATENRQFFLEAN 533
                    .|:..:|:..|.|.....|.:.:|| :|..|:.|..|::. .....:.|...|...:
  Fly   414 TRLLISLSCIFSFMLMQFYGAFIVGSLLSESAR-SIVNLQALYDSNLAIGMENISYNFPIFTNTS 477

  Fly   534 DEVARKVGEKMEVFGYSDDLTS------RIAKGQCAYY---DNEFYLRYLRVADESGSALHIMKE 589
            :::.|.|..|........::.|      ||.:|:.|::   |..:.|......||  :....::|
  Fly   478 NQLVRDVYVKKICKSGEHNIMSLQQGAERIIQGRFAFHTAIDRMYRLLLELQMDE--AEFCDLQE 540

  Fly   590 CVLYMPV--VLAMEKNSALKPRVDASIQHLAEGGLI----AKWLKDAIEHLPAEALAQQEALMNI 648
            .:..:|.  ...|.|.|..:..:..::.|....||:    .||:   :...........:|.:::
  Fly   541 VMFNLPYDSGSVMPKGSPWREHLAHALLHFRATGLLQYNDKKWM---VRRPDCSLFKTSQAEVDL 602

  Fly   649 QKFWSSFVALLIGYVISMLTLLAE 672
            :.|..:..||.:..|.|.|..|.|
  Fly   603 EHFAPALFALALAMVASALVFLLE 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 57/321 (18%)
Ir84aNP_649720.2 nt_trans <54..>112 CDD:294020 8/59 (14%)
Periplasmic_Binding_Protein_Type_2 222..583 CDD:304360 64/363 (18%)
Lig_chan 355..602 CDD:278489 47/252 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462712
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.