DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68a and Ir56c

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_611431.1 Gene:Ir56c / 37251 FlyBaseID:FBgn0034457 Length:567 Species:Drosophila melanogaster


Alignment Length:700 Identity:119/700 - (17%)
Similarity:225/700 - (32%) Gaps:254/700 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 IFFESVGRRV--IPFFVMRTNESDDLQRPSRQVELFVKAIKSSDCELNVITILNGWQVQRFLGYI 131
            ::|.|..:|:  :..|:||.:|:            |.|:...        |::|.....|.   |
  Fly    21 VWFVSPHQRLDQLDEFIMRIDEA------------FGKSATQ--------TVVNNNTEMRM---I 62

  Fly   132 YDNRSLN-------------MQKKF--VLLHDLRLFESDMIHLWSVFIDAIFLKRQLDNKYTIST 181
            |.:...|             :.|.|  |||.  |.|...|:    :::|.:   ..:...|.:.|
  Fly    63 YSSARRNHMSFVFTTGAEDPIMKVFSKVLLG--RHFYVSMV----IYVDKV---GDMHPIYDLLT 118

  Fly   182 IAFPGILSGVLVMKNIANWELGKGLNGRILFADKTSNLFGTSLPVAISEHVPMVLWANATKSFQG 246
            .|:     ......::.::|..:|:|          .|||.|       ..|::.:.|.|     
  Fly   119 FAY-----NQQFFNSMVHFESMEGVN----------QLFGVS-------KFPVMSFENRT----- 156

  Fly   247 VEVEIMNALGKALNFKPVYYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHI--------- 302
               :.:..:||.                 |.::....|...|.|......|:..|:         
  Fly   157 ---DFLKYMGKI-----------------WKQVQNARSDVGGFGFTTPLRQDLPHLFQSQGHYDG 201

  Fly   303 ------------------------DSM------LVD----------EVAAHSARFAIGDLHLFQV 327
                                    ||:      :.|          |..||:....:.|..|.:.
  Fly   202 STYRIIETFVRFINGSFKELIMPPDSLGGQVINMKDALQLIRERKMEFCAHAYALFMSDEELEKS 266

  Fly   328 YLKLVE---LSAPHNFECLTFLTPESSTDNSWQTFILPFSAGMW---VGVLLSLFVVGTVFYAI- 385
            |..||.   |..|......|:..|           :.||...:|   :|.||:|.::..::..: 
  Fly   267 YPLLVVQWCLMVPLYNSVSTYFYP-----------LQPFDWNVWFFALGALLALVLLELMWLRMF 320

  Fly   386 ----SFLNAIINGNVSSEFFRCLRPNRNVPMDPKIYRRISFRIAISRYRSSKGDRMPRDLFDGYT 446
                .:..|::|     .|...:    |||::.::                   :.|        
  Fly   321 GGWSGYRGAVLN-----SFCYII----NVPIEGQL-------------------QQP-------- 349

  Fly   447 NCILLTYSMLLYVALPRMPRNWPLRVLTGWYWIYCILLVATYRASFTAILANPAARVTIDTLEDL 511
             | ||.:.:|..|                  :.:...|.|.|.::..:||........|:|:.|:
  Fly   350 -C-LLRFLLLATV------------------FFHGFFLSAYYTSNLGSILTVNLFHAQINTMNDI 394

  Fly   512 LRSHIPPSTGATENRQFFLEANDEVARKVGEKMEVFG---YSDDLTSRIAKGQCAYYDNEFYLRY 573
            :.:.:|......| .:|.|..|.|:.::..|.:....   :|:..||  .....||:..|.:..:
  Fly   395 VSAQLPVMIIDYE-MEFLLNLNKELPQEFLELLRPVDSAVFSEHQTS--FNSSFAYFVTEDHWEF 456

  Fly   574 LRVADESGSAL-----HIMKECVLYMPVVLAMEKNSALKPRVDASIQHLAEGGLIAKWLKDA--- 630
            |   ||....|     .:...|.....:...::.:|:|...::.....:...||:..:.:.:   
  Fly   457 L---DEQQKHLKQRLFKLSSICFGSYHLAFPLQMDSSLWRDIEYFTFRIHSSGLLNFYARSSFGS 518

  Fly   631 ------IEHLPAEALAQQEALMNIQKFWSSFVALLI-----GYVISMLTL 669
                  ::.:|.   .|:.....:|....:|:.||:     |.|..:.||
  Fly   519 ALHAGLVQRMPD---TQEYTSAGLQHLAIAFILLLVMSFLAGIVFVLETL 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 42/253 (17%)
Ir56cNP_611431.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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