DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68a and Ir48c

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster


Alignment Length:729 Identity:129/729 - (17%)
Similarity:241/729 - (33%) Gaps:239/729 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ILIVAFISLAMATSIPIPIANPAPLSGYEMQLKILLQKILWVANVKRCFAVITDDLHYPIYDRIF 70
            |||:.|  |.:.:|||..|     :|....:|:|.:|....:.|              .:||...
  Fly     7 ILIIIF--LRIVSSIPDTI-----ISHLSAELQIKIQIYFGLGN--------------DLYDFSR 50

  Fly    71 FESVGRRVIPFFVMRTNESDDLQRPSRQVELFVKAIKSSDCELNVITILNGWQVQRFLGYIYDNR 135
            .:...:::|    :..|.|::.:....:..|.:..:: .|..||:.|:    .|.|  .|:.|.:
  Fly    51 LDGNYQKII----ISHNISEEFKTYHDEPVLIIIRLE-RDLNLNLATL----DVLR--SYLTDRQ 104

  Fly   136 SLNMQKKFVLLHDLRLFESDMIHL----------WSVFIDAIFLKRQLDNKYTISTIAF----PG 186
                      .:|:.|.::|..:|          |:.....:.:.......::|....:    |.
  Fly   105 ----------YNDILLIDNDEENLNSYVDIRKAYWNAGFSQVLIYNSQQRTWSIKPYPYLQIRPT 159

  Fly   187 ILSGVLVMKNIANWELGKGLNGRILFADKTSNLFGTSLPVAISEHVPMVL-----WANATKSFQG 246
            .|...:..:|                   |.||.|..|.|.::...|...     ...:...::|
  Fly   160 SLKEYIENRN-------------------TRNLMGYPLRVLVTNDPPHCFVDKDELPGSPNRYKG 205

  Fly   247 VEVEIMNALGKALNFKPVYYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSMLV---D 308
            ..|.::......||                         |....||....:..:..|.:.:   |
  Fly   206 SIVTMLKIFADQLN-------------------------ATFQANPFREFRRYSTADCVQMVSDD 245

  Fly   309 EVAAHSARFAIGDLHLFQVYLKLVELSAPHNFECLTFLTPESSTDNSWQTFILPFSAGMWVG--- 370
            |:.|..:.|       .:.|  ....|.|.....:..:.|..:....:..|..||...:|:|   
  Fly   246 EIDACGSIF-------IRTY--TYATSQPVRLNRVVIMAPFGNPIEKFYYFFRPFDLYVWIGTGI 301

  Fly   371 VLLSLFVVGTVFYAISFLNAIINGNVSSEFFRCLRP--NRNVPMDPKIYRRISFRIAISRYRSSK 433
            :::.:.|:|::.:...|.    ..||.......::.  ||.                :|..:||.
  Fly   302 IVVYIAVMGSLLHRWHFK----EWNVGQYLLLAVQTLLNRE----------------LSLPQSSS 346

  Fly   434 GDRMPRDLFDGYTNCILLTYSM-----LLYVALPRMPRNWPLRVLTGWYWIYCILLVATYRASFT 493
            |.:.         ..:||.:::     .|||||..|                 :|....|:....
  Fly   347 GSKF---------MLLLLLFAIGFILSNLYVALLSM-----------------MLTTKLYQRPIE 385

  Fly   494 AILANPAARVTIDTLEDLLRSH-IPPSTGATENRQFFLEANDEVARKVGEKMEVFGYSDDLTSR- 556
            .:....||.|.|     ||::| |.|::                         |:|.|::|..| 
  Fly   386 NLADLKAANVNI-----LLQTHNIRPNS-------------------------VYGSSEELRERF 420

  Fly   557 --IAKGQ-----------CAYYDNE----FYL---RYLRVADESGSALHIMKECVLYMPVVLAME 601
              :.:.|           .||.|:|    |||   ::||     ...:..:...|.|...|..::
  Fly   421 LLVEESQHLEKRNGLDPSYAYVDSEDRMDFYLYQQKFLR-----RRRMKKLSNPVGYTWAVQVIK 480

  Fly   602 KNSALKPRVDASIQHLAEGGLIAKWLKDAIEHLPAEA------LAQQEAL--MNIQKFWSSFVAL 658
            :|..|:...:..:|...|.||..| |.|.:..|..:|      ..|.:.:  :.::....:.:.|
  Fly   481 QNWVLEKHYNDHVQRFFETGLQNK-LVDDVHELAVKAGFLHFFPTQTQTIEPLRLEDIVMAAMVL 544

  Fly   659 LIGYVISMLTLLAE 672
            ..|:.::::..|.|
  Fly   545 GGGHALAVICFLVE 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 53/266 (20%)
Ir48cNP_610700.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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