DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68a and clumsy

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_001036373.1 Gene:clumsy / 35394 FlyBaseID:FBgn0026255 Length:1002 Species:Drosophila melanogaster


Alignment Length:820 Identity:150/820 - (18%)
Similarity:279/820 - (34%) Gaps:273/820 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LLQKILWVANVKRCFAVI--TDDLHYPIYDRIFFESVGRRVI-PFFVMRTNESDDLQRPSRQVEL 101
            ::|...|     |.|.|:  ||.....:.|.:   .||..:. |..|.:....|| .||      
  Fly   148 IVQSFAW-----RSFTVVYETDKELQQLQDIL---QVGEPISNPTTVKQLGPGDD-HRP------ 197

  Fly   102 FVKAIKSS--DCEL------NVITILNGWQVQRFLGYIYDNRSLNMQKKFVLLHD---------- 148
            |:|.||.|  :|.:      |::.||......:.||        ..|..|:.|.|          
  Fly   198 FLKEIKLSTDNCLILHCAPDNLLKILQQANELKMLG--------EYQSVFIPLLDTHSIDFGELS 254

  Fly   149 --------LRLFESDMIHLWSVFIDAIFLKRQLDNKYTISTIAFPGILSGVLVMKNIANWELGKG 205
                    :||.:....|:.:|..|....:::....:.:.    |..:...:::.|.|.|...||
  Fly   255 GVEANITTVRLMDPSDFHVKNVVHDWEEREKREGRYFKVD----PNRVKSQMILLNDAVWLFSKG 315

  Fly   206 L----------------------------------------NGRILFADKTSNLFGTSLPVAISE 230
            |                                        .|||.|.:.....|.|...:.::.
  Fly   316 LTELGIFEELTAPDLECRRKKPWPFGKRIIEFIKARSEETSTGRIDFNENGQRSFFTLRFMELNS 380

  Fly   231 --HVPMVLW-----------------------ANAT--------------------------KSF 244
              .:.:..|                       :|.|                          ..:
  Fly   381 DGFLDLATWDPVNGLDVLNDDEESEKRVGQKLSNKTFIVSSRLGAPFLTLREPQEGEILTGNSRY 445

  Fly   245 QGVEVEIMNALGKALNFKPVY-YKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSMLVD 308
            :|..::::|.:.|.||||..: ..|           ||    .||:.|......:|      :|.
  Fly   446 EGYSIDLINEIAKMLNFKFEFRMSP-----------DG----KYGALNKVTQTWDG------IVR 489

  Fly   309 EVAAHSARFAIGDLHLFQVYLKLVELSAPHNFECLTFLT----------PESSTDNSWQTFILPF 363
            ::...:|...|.||.:.....:.|:.:.|       |:|          |...||  ..:|:.||
  Fly   490 QLIDGNADLGICDLTMTSSRRQAVDFTPP-------FMTLGISILFSKPPTPPTD--LFSFLSPF 545

  Fly   364 SAGMWVGVLLSLFVVGTVFYAISFLNAIINGNVSSEFFRCLRPNRNVPMDPKIYRRISFRIAISR 428
            |..:|:.:..:...:..:.:|::                                    |:|...
  Fly   546 SLDVWIYMGSAYLFISLLLFALA------------------------------------RMAPDD 574

  Fly   429 YRSSKGDRMPRDLFDGYT--NCILLTYSMLLYVALPRMPRNWPLRVLTGWYWIYCILLVATYRAS 491
            :.:....:.|.::.:.::  |...|:...|:......:|:....|::||.:|.:.::::.:|.|:
  Fly   575 WENPHPCKEPEEVENIWSIMNTTWLSIGSLMGQGCDILPKAASTRLVTGMWWFFALMMLNSYTAN 639

  Fly   492 FTAILANPAARVTIDTLEDL-LRSHI---PPSTGATENRQFFLEANDEVARKVGEKME-----VF 547
            ..|.|.|.....:|::.||| .:|.|   ..:.|:|..  ||.::|....:|:...||     ||
  Fly   640 LAAFLTNSRQANSINSAEDLAAQSKIKYGAMAGGSTMG--FFRDSNFSTYQKMWTAMESASPSVF 702

  Fly   548 -GYSDDLTSRIAKGQCAYYDNEFYLRYLRVADESGSALHIMKECVL--------YMPVVLAMEKN 603
             ..:|:...|:.||:..|   .|.:      :.:....::.::|.|        |....:||..|
  Fly   703 TKTNDEGVERVQKGKNLY---AFLM------ESTTLEYNVERKCDLVQIGGWLDYKSYGIAMPFN 758

  Fly   604 SALKPRVDASIQHLAEGGLIA----KWLKDAIEHLPAEALAQQE-----ALMNIQKFWSSFVALL 659
            |..:.::.|::..|.|.|.:|    ||.|:.  |.........|     ..:.::.....|:.|.
  Fly   759 SPYRKQISAAVLKLGELGQLAELKRKWWKEM--HGGGNCEKSDEDGGDTPELGLENVGGVFLVLG 821

  Fly   660 IGYVISMLTLLAE-RWHFKHIVMKHPMYDVYNPSLYYNFK 698
            :|.:.:|:....| .|:.|.:.::..:      ||...||
  Fly   822 LGLLSAMVLGCTEFLWNVKSVAIEEKI------SLKEAFK 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 55/260 (21%)
clumsyNP_001036373.1 PBP1_iGluR_Kainate 26..396 CDD:107377 50/274 (18%)
ANF_receptor 39..379 CDD:279440 49/257 (19%)
PBP2_iGluR_Kainate 414..787 CDD:270432 86/449 (19%)
Lig_chan 548..812 CDD:278489 57/312 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462580
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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