Protein Alignment Ir68a and GluRIIA

DIOPT Version :9

• Sequence 1: NP_648455.2
• Gene: Ir68a / 39269
• FlyBaseID: FBgn0036150
• Length: 704
• Species: Drosophila melanogaster
• Sequence 2: NP_523484.2
• Gene: GluRIIA / 33788
• FlyBaseID: FBgn0004620
• Length: 907
• Species: Drosophila melanogaster
• Alignment Length: 495
• Identity: 95/495 - (19%)
• Similarity: 191/495 - (38%)
• Gaps: 117/495 - (23%)

  Fly   242 KSFQGVEVEIMNALGKALNFKPVYYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSML 306
            :.::|..|::::.|.:.:.|           :.::..::|.     |..||:....:|  |...|
  Fly   453 EKYEGYAVDLISKLSELMEF-----------DYEFMIVNGN-----GKYNPETKQWDG--IIRKL 499

  Fly   307 VDEVAAHSARFAIGDLHLFQVYLKLVELSAPHNFECLTFLTPESSTDNSWQ-TFILPFSAGMWVG 370
            :|    |.|:..:.||.:.|:...:|:.:.|.....::.|..:|..:...| .|:.||:..:|:.
  Fly   500 ID----HHAQIGVCDLTITQMRRSVVDFTVPFMQLGISILHYKSPPEPKNQFAFLEPFAVEVWIY 560

  Fly   371 VLLSLFVVGTVFYAISFLNAIINGNVSSEFFRCLRPNRNVPMDPKIYRRISFRIAISRYRSSKGD 435
            ::.:..::...|..|:.|:          :...|.||..: .||.....|.
  Fly   561 MIFAQLIMTLAFVFIARLS----------YREWLPPNPAI-QDPDELENIW-------------- 600

  Fly   436 RMPRDLFDGYTNCILLTYSMLLYVALPRMPRNWPLRVLTGWYWIYCILLVATYRASFTAILANPA 500
                    ...|...|....::......:||...:|:|||.:|.:.:::::||.|:..|.|.:..
  Fly   601 --------NVNNSTWLMVGSIMQQGCDILPRGPHMRILTGMWWFFALMMLSTYTANLAAFLTSNK 657

  Fly   501 ARVTIDTLEDLL---RSHIPPSTGATENRQFFLEANDEVARKVGEKMEVFGYSDDLTSRIAKGQC 562
            .:.:|.:|:||:   :.|.....|.:.: .||.|:||...::...:|:.|..| ..||...:|
  Fly   658 WQSSIKSLQDLIEQDKVHFGSMRGGSTS-LFFSESNDTDYQRAWNQMKDFNPS-AFTSTNKEG-- 718

  Fly   563 AYYDNEFYLRYLRVADESGSALHIMKECVLYMPVV------------------LAMEKNSALKPR 609
                      ..||..|.|....:|:...|...:.                  ||:...|..:..
  Fly   719 ----------VARVRKEKGGYAFLMETTSLTYNIERNCDLTQIGEQIGEKHYGLAVPLGSDYRTN 773

  Fly   610 VDASIQHLAEGGLIA----KWLK------DAIEHLPAEALAQQEALMNIQKFWSSFVAL----LI 660
            :..||..|:|.|.:.    ||.|      |:...:..:.|       :|.:....|:.|    ||
  Fly   774 LSVSILQLSERGELQKMKNKWWKNHNVTCDSYHEVDGDEL-------SIIELGGVFLVLAGGVLI 831

  Fly   661 GYVISMLTLLAERWHFKHIVMKHPM--YDVYNPSLYYNFK 698
            |.::.:...|   |:.:::.::..:  :..:...|.:..|
  Fly   832 GVILGIFEFL---WNVQNVAVEERVTPWQAFKAELIFALK 868

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ir68a	NP_648455.2	Lig_chan	429..661	CDD:278489	54/266 (20%)
GluRIIA	NP_523484.2	PBP1_iGluR_Kainate	33..404	CDD:107377
		ANF_receptor	46..386	CDD:279440
		PBP2_iGluR_Kainate	426..796	CDD:270432	82/411 (20%)
		Lig_chan	556..828	CDD:278489	63/325 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45462579
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1052
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.740