DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68a and GRIN2A

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:XP_016878661.1 Gene:GRIN2A / 2903 HGNCID:4585 Length:1516 Species:Homo sapiens


Alignment Length:641 Identity:121/641 - (18%)
Similarity:221/641 - (34%) Gaps:166/641 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LNVITILNGWQVQRFLGYIYDNRSL---NMQKKFVLLHDLRLFESDMIHLWSVFIDAIFLKRQLD 174
            :.::|......:::| .||.:.::.   .|::..|.:|.|..|   |:::.....|..|    .:
Human   348 IGILTTAASSMLEKF-SYIPEAKASCYGQMERPEVPMHTLHPF---MVNVTWDGKDLSF----TE 404

  Fly   175 NKYTISTIAFPGILSGVLVMKNIANWE-LGKGLNGRI-----------LFADKTSNLFGTSLPVA 227
            ..|.:    .|.::  |:|:.....|| :||..|..:           .|:|...:  ...|.:.
Human   405 EGYQV----HPRLV--VIVLNKDREWEKVGKWENHTLSLRHAVWPRYKSFSDCEPD--DNHLSIV 461

  Fly   228 ISEHVPMVL------------------------------WANATKSFQGVEVEIMNALGKALNFK 262
            ..|..|.|:                              ..|..|..:|..::|:..|.:.:.|.
Human   462 TLEEAPFVIVEDIDPLTETCVRNTVPCRKFVKINNSTNEGMNVKKCCKGFCIDILKKLSRTVKFT 526

  Fly   263 PVYY-----KPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSMLVDEVAAHSARFAIGDL 322
            ...|     |..:..|..|                     ||      ::.||....|..|:|.|
Human   527 YDLYLVTNGKHGKKVNNVW---------------------NG------MIGEVVYQRAVMAVGSL 564

  Fly   323 HLFQVYLKLVELSAPHNFECLTFLTPESSTDNSWQTFILPFSAGMWVGVLLSLFVVGTVFYAISF 387
            .:.:...::|:.|.|.....::.:...|:...|...|:.||||.:||.:.:.|.:|..:...:  
Human   565 TINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFV-- 627

  Fly   388 LNAIINGNVSSEFFRCLRPNRNV-----PMDPKIYRRISFRIAISRYRSSKGDRMPRDLFDGYTN 447
                      .|:|..:..|||:     |..|      ||.|.                     .
Human   628 ----------FEYFSPVGYNRNLAKGKAPHGP------SFTIG---------------------K 655

  Fly   448 CILLTYSMLLYVALP-RMPRNWPLRVLTGWYWIYCILLVATYRASFTAILANPAARVTIDTLED- 510
            .|.|.:.::...::| :.|:....:::...:..:.::.:|:|.|:..|.:........:..|.| 
Human   656 AIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDK 720

  Fly   511 -LLRSH--IPP------STGATENRQFFLEANDEVARKVGEKMEVFGYSDDLTS-RIAKGQCAYY 565
             ..|.|  .||      ..|:||..   :..|.....:...|....|..|.|.| :..|.....|
Human   721 KFQRPHDYSPPFRFGTVPNGSTERN---IRNNYPYMHQYMTKFNQKGVEDALVSLKTGKLDAFIY 782

  Fly   566 DNEFYLRYLRVADESGSALHIMKECVLYMPV--VLAMEKNSALKPRVD-ASIQHLAEG---GLIA 624
            | ...|.|....|| |..|..:....::...  .:|::|.|..|.::| |.:|.:.:|   .|..
Human   783 D-AAVLNYKAGRDE-GCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELET 845

  Fly   625 KWLKDAIEHLPAEALAQQEALMNIQKFWSSFVALLIGYVISMLTLLAER---WHFK 677
            .||.....:...|.::.|   ::|......|..|.....:|::|.:.|.   |..:
Human   846 LWLTGICHNEKNEVMSSQ---LDIDNMAGVFYMLAAAMALSLITFIWEHLFYWKLR 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 48/249 (19%)
GRIN2AXP_016878661.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155879
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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