DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68a and GRIK5

DIOPT Version :10

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:XP_011525167.1 Gene:GRIK5 / 2901 HGNCID:4583 Length:982 Species:Homo sapiens


Alignment Length:642 Identity:123/642 - (19%)
Similarity:222/642 - (34%) Gaps:205/642 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 YD----RIFFESVGRRVIPFFVMRTNESDDLQRPSRQVELFVKAIKSSDCELNVITILNGWQVQR 126
            ||    |:.|.|.|:        |||.:..:...||                         |..|
Human   355 YDGLTGRVEFNSKGQ--------RTNYTLRILEKSR-------------------------QGHR 386

  Fly   127 FLGYIYDNRSLNMQKKFVLLHDLRLFESDMIHLWSVFIDAIFLKRQLDNKYTISTIAFPGILSGV 191
            .:|..|.||:|.|.                    :..:| |.|.:.|.||    |:....||...
Human   387 EIGVWYSNRTLAMN--------------------ATTLD-INLSQTLANK----TLVVTTILENP 426

  Fly   192 LVMKNIANWELGKGLNGRILFADKTSNLFGTSLPVAISEHVPMVLWANATKSFQGVEVEIMNALG 256
            .||:. .|::   .|:|                                .:.|:|..|:::..|.
Human   427 YVMRR-PNFQ---ALSG--------------------------------NERFEGFCVDMLRELA 455

  Fly   257 KALNFKPVYYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSMLVDEVAAHSARFAIGD 321
            :.|.|:   |:....|       ||    .||:..|:| :..|     |:.:.:....|..|:..
Human   456 ELLRFR---YRLRLVE-------DG----LYGAPEPNG-SWTG-----MVGELINRQKADLAVAA 500

  Fly   322 LHLFQVYLKLVELSAPHNFECLTFLT--------PESSTDNSWQTFILPFSAGMWVGVLLSLFVV 378
            ..:.....|:::.|.|       |:|        ........:.:|:.|||..:|:.:||:...|
Human   501 FTITAEREKVIDFSKP-------FMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAV 558

  Fly   379 GTVFYAISFLNAIINGNVSSEFFR---CLRPNRNVPMDPKIYRRISFRIAISRYRSSKGDRMPRD 440
            ..|.:..:.|:..       |::.   |||..                              |..
Human   559 SCVLFLAARLSPY-------EWYNPHPCLRAR------------------------------PHI 586

  Fly   441 LFDGYT--NCILLTYSMLLYVALPRMPRNWPLRVLTGWYWIYCILLVATYRASFTAILANPAARV 503
            |.:.||  |.:.......:......|||....|.::|.:|.:.::::::|.|:..|.|......|
Human   587 LENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEV 651

  Fly   504 TIDTLEDLL-RSHIPPST---GATENRQFFLEANDEVARKVGEKME-----VFGYS-DDLTSRIA 558
            .:::.:||. :::|...|   |:|  ..||..:..:..:::...|:     ||..| ::..:|:.
Human   652 PVESADDLADQTNIEYGTIHAGST--MTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVL 714

  Fly   559 KGQCAYY----DNEFYLRYLRVADESGSALHIMKECVLYMPVVLAMEKNSALKPRVDASIQHLAE 619
            ..:.|:.    .||::.|......:.|..|. .|...:.||:      .|..:..:..:|..|.|
Human   715 NSRYAFLLESTMNEYHRRLNCNLTQIGGLLD-TKGYGIGMPL------GSPFRDEITLAILQLQE 772

  Fly   620 GG----LIAKWLKDAIEHLPAEALAQQEALMNIQKFWSSFVALLIGYVISMLTLLAE 672
            ..    |..||.:..  ..|.|...:.:.| .::.....|:.|:.|.:|::...:.|
Human   773 NNRLEILKRKWWEGG--RCPKEEDHRAKGL-GMENIGGIFIVLICGLIIAVFVAVME 826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 367..661 CDD:459656 60/316 (19%)
GRIK5XP_011525167.1 PBP1_iGluR_Kainate_KA1_2 23..401 CDD:380616 19/98 (19%)
Periplasmic_Binding_Protein_Type_2 414..785 CDD:473866 92/483 (19%)

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