DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68a and GRIK5

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:XP_011525167.1 Gene:GRIK5 / 2901 HGNCID:4583 Length:982 Species:Homo sapiens


Alignment Length:642 Identity:123/642 - (19%)
Similarity:222/642 - (34%) Gaps:205/642 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 YD----RIFFESVGRRVIPFFVMRTNESDDLQRPSRQVELFVKAIKSSDCELNVITILNGWQVQR 126
            ||    |:.|.|.|:        |||.:..:...||                         |..|
Human   355 YDGLTGRVEFNSKGQ--------RTNYTLRILEKSR-------------------------QGHR 386

  Fly   127 FLGYIYDNRSLNMQKKFVLLHDLRLFESDMIHLWSVFIDAIFLKRQLDNKYTISTIAFPGILSGV 191
            .:|..|.||:|.|.                    :..:| |.|.:.|.||    |:....||...
Human   387 EIGVWYSNRTLAMN--------------------ATTLD-INLSQTLANK----TLVVTTILENP 426

  Fly   192 LVMKNIANWELGKGLNGRILFADKTSNLFGTSLPVAISEHVPMVLWANATKSFQGVEVEIMNALG 256
            .||:. .|::   .|:|                                .:.|:|..|:::..|.
Human   427 YVMRR-PNFQ---ALSG--------------------------------NERFEGFCVDMLRELA 455

  Fly   257 KALNFKPVYYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSMLVDEVAAHSARFAIGD 321
            :.|.|:   |:....|       ||    .||:..|:| :..|     |:.:.:....|..|:..
Human   456 ELLRFR---YRLRLVE-------DG----LYGAPEPNG-SWTG-----MVGELINRQKADLAVAA 500

  Fly   322 LHLFQVYLKLVELSAPHNFECLTFLT--------PESSTDNSWQTFILPFSAGMWVGVLLSLFVV 378
            ..:.....|:::.|.|       |:|        ........:.:|:.|||..:|:.:||:...|
Human   501 FTITAEREKVIDFSKP-------FMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAV 558

  Fly   379 GTVFYAISFLNAIINGNVSSEFFR---CLRPNRNVPMDPKIYRRISFRIAISRYRSSKGDRMPRD 440
            ..|.:..:.|:..       |::.   |||..                              |..
Human   559 SCVLFLAARLSPY-------EWYNPHPCLRAR------------------------------PHI 586

  Fly   441 LFDGYT--NCILLTYSMLLYVALPRMPRNWPLRVLTGWYWIYCILLVATYRASFTAILANPAARV 503
            |.:.||  |.:.......:......|||....|.::|.:|.:.::::::|.|:..|.|......|
Human   587 LENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEV 651

  Fly   504 TIDTLEDLL-RSHIPPST---GATENRQFFLEANDEVARKVGEKME-----VFGYS-DDLTSRIA 558
            .:::.:||. :::|...|   |:|  ..||..:..:..:::...|:     ||..| ::..:|:.
Human   652 PVESADDLADQTNIEYGTIHAGST--MTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVL 714

  Fly   559 KGQCAYY----DNEFYLRYLRVADESGSALHIMKECVLYMPVVLAMEKNSALKPRVDASIQHLAE 619
            ..:.|:.    .||::.|......:.|..|. .|...:.||:      .|..:..:..:|..|.|
Human   715 NSRYAFLLESTMNEYHRRLNCNLTQIGGLLD-TKGYGIGMPL------GSPFRDEITLAILQLQE 772

  Fly   620 GG----LIAKWLKDAIEHLPAEALAQQEALMNIQKFWSSFVALLIGYVISMLTLLAE 672
            ..    |..||.:..  ..|.|...:.:.| .::.....|:.|:.|.:|::...:.|
Human   773 NNRLEILKRKWWEGG--RCPKEEDHRAKGL-GMENIGGIFIVLICGLIIAVFVAVME 826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 50/251 (20%)
GRIK5XP_011525167.1 PBP1_iGluR_Kainate_KA1_2 25..399 CDD:107389 18/76 (24%)
ANF_receptor 42..379 CDD:279440 9/31 (29%)
Periplasmic_Binding_Protein_Type_2 414..785 CDD:304360 92/483 (19%)
Lig_chan 546..816 CDD:278489 60/318 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155891
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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