DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68a and GRIK4

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_001269399.1 Gene:GRIK4 / 2900 HGNCID:4582 Length:956 Species:Homo sapiens


Alignment Length:736 Identity:149/736 - (20%)
Similarity:274/736 - (37%) Gaps:182/736 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IVAFISLAMATSIPIPIANPAPLSGYE----MQLKILLQKILWVANVKRCFAVITDD----LHYP 64
            |:...:.:|:.:|.:..|....:|.|.    ..|:..||::          ..:.||    |.:.
Human   215 IIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRM----------DSLVDDRVNILGFS 269

  Fly    65 IYDR--IFFESVGRRVIPFFVMRTNESDDLQRPSRQVELFVKAIKSS---DCELNVITILNGWQV 124
            |:::  .||:.        |....|:|  .|.....|.....|:.|:   |....|:|     .|
Human   270 IFNQSHAFFQE--------FAQSLNQS--WQENCDHVPFTGPALSSALLFDAVYAVVT-----AV 319

  Fly   125 QRFLGYIYDNRSLNMQKKFVLLHDLRLFE---SDMIHLWSVFIDAI-----FLKRQLDNKYTIST 181
            |..      |||..:..|.:.....::::   |.|.:|..|.::.:     |..:...:.|.:..
Human   320 QEL------NRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKI 378

  Fly   182 IAFPGILSGVLVMKNIANWELGKGLN-GRILFADKTSN-LFGTSLPV-AISEHVPMVLWAN---- 239
            :.|  ..:|   .:.|..|.:.:||: ...|:|...|: ||.|:|.| .|.|:..::|..|    
Human   379 LQF--TRNG---FRQIGQWHVAEGLSMDSHLYASNISDTLFNTTLVVTTILENPYLMLKGNHQEM 438

  Fly   240 -ATKSFQGVEVEIMNALGKALNFKPVYYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHID 303
             ....::|..|:::..|.:.|.|.   ||         ..|.|..  .||.  |:.   |||.  
Human   439 EGNDRYEGFCVDMLKELAEILRFN---YK---------IRLVGDG--VYGV--PEA---NGTW-- 482

  Fly   304 SMLVDEVAAHSARFAIGDLHLFQVYLKLVELSAPHNFECLTFLT--------PESSTDNSWQTFI 360
            :.:|.|:.|..|..|:..|.:.....|:::.|.|       |:|        ........:.:|:
Human   483 TGMVGELIARKADLAVAGLTITAEREKVIDFSKP-------FMTLGISILYRVHMGRKPGYFSFL 540

  Fly   361 LPFSAGMWVGVLLSLFVVGTVFYAISFLNAIINGNVSSEFFRCLRPNRNVPMDPKIYRRISFRIA 425
            .|||.|:|:.:||:...|..|.:.::.|...       |::                        
Human   541 DPFSPGVWLFMLLAYLAVSCVLFLVARLTPY-------EWY------------------------ 574

  Fly   426 ISRYRSSKGDRMPRDLFDGYTNCILLTYSM----------LLYVALPRMPRNWPLRVLTGWYWIY 480
                       .|.....|..|.::..||:          .:.......||....|.::|.:|.:
Human   575 -----------SPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRALSTRCVSGVWWAF 628

  Fly   481 CILLVATYRASFTAILANPAARVTIDTLEDLL-RSHIPPST--GATENRQFFLEANDEVARKVGE 542
            .::::::|.|:..|.|......|.|::::||. ::.|...|  |.: :..||..:..:..:::..
Human   629 TLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGTIHGGS-SMTFFQNSRYQTYQRMWN 692

  Fly   543 KM-----EVFGYS-DDLTSRIAKGQCAYY----DNEFYLRYLRVADESGSALHIMKECVLYMPVV 597
            .|     .||..| ::..:|:.....|:.    .||:|.:......:.|..|. .|...:.||| 
Human   693 YMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLD-TKGYGIGMPV- 755

  Fly   598 LAMEKNSALKPRVDASIQHLAEGG----LIAKWLKDAIEHLPAEALAQQEALMNIQKFWSSFVAL 658
                 .|..:...|.:|..|.|..    |..||.:..  ..|.|...:.:.| .::.....||.|
Human   756 -----GSVFRDEFDLAILQLQENNRLEILKRKWWEGG--KCPKEEDHRAKGL-GMENIGGIFVVL 812

  Fly   659 LIGYVISM-LTLLAERWHFKH 678
            :.|.:::: :.:|...|..:|
Human   813 ICGLIVAIFMAMLEFLWTLRH 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 52/258 (20%)
GRIK4NP_001269399.1 PBP1_iGluR_Kainate_KA1_2 26..400 CDD:107389 43/220 (20%)
ANF_receptor 43..382 CDD:279440 38/199 (19%)
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 91/447 (20%)
Lig_chan 547..816 CDD:278489 59/321 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..889
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155758
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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