DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68a and GRIK4

DIOPT Version :10

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_055434.2 Gene:GRIK4 / 2900 HGNCID:4582 Length:956 Species:Homo sapiens


Alignment Length:736 Identity:149/736 - (20%)
Similarity:274/736 - (37%) Gaps:182/736 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IVAFISLAMATSIPIPIANPAPLSGYE----MQLKILLQKILWVANVKRCFAVITDD----LHYP 64
            |:...:.:|:.:|.:..|....:|.|.    ..|:..||::          ..:.||    |.:.
Human   215 IIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRM----------DSLVDDRVNILGFS 269

  Fly    65 IYDR--IFFESVGRRVIPFFVMRTNESDDLQRPSRQVELFVKAIKSS---DCELNVITILNGWQV 124
            |:::  .||:.        |....|:|  .|.....|.....|:.|:   |....|:|     .|
Human   270 IFNQSHAFFQE--------FAQSLNQS--WQENCDHVPFTGPALSSALLFDAVYAVVT-----AV 319

  Fly   125 QRFLGYIYDNRSLNMQKKFVLLHDLRLFE---SDMIHLWSVFIDAI-----FLKRQLDNKYTIST 181
            |..      |||..:..|.:.....::::   |.|.:|..|.::.:     |..:...:.|.:..
Human   320 QEL------NRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKI 378

  Fly   182 IAFPGILSGVLVMKNIANWELGKGLN-GRILFADKTSN-LFGTSLPV-AISEHVPMVLWAN---- 239
            :.|  ..:|   .:.|..|.:.:||: ...|:|...|: ||.|:|.| .|.|:..::|..|    
Human   379 LQF--TRNG---FRQIGQWHVAEGLSMDSHLYASNISDTLFNTTLVVTTILENPYLMLKGNHQEM 438

  Fly   240 -ATKSFQGVEVEIMNALGKALNFKPVYYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHID 303
             ....::|..|:::..|.:.|.|.   ||         ..|.|..  .||.  |:.   |||.  
Human   439 EGNDRYEGFCVDMLKELAEILRFN---YK---------IRLVGDG--VYGV--PEA---NGTW-- 482

  Fly   304 SMLVDEVAAHSARFAIGDLHLFQVYLKLVELSAPHNFECLTFLT--------PESSTDNSWQTFI 360
            :.:|.|:.|..|..|:..|.:.....|:::.|.|       |:|        ........:.:|:
Human   483 TGMVGELIARKADLAVAGLTITAEREKVIDFSKP-------FMTLGISILYRVHMGRKPGYFSFL 540

  Fly   361 LPFSAGMWVGVLLSLFVVGTVFYAISFLNAIINGNVSSEFFRCLRPNRNVPMDPKIYRRISFRIA 425
            .|||.|:|:.:||:...|..|.:.::.|...       |::                        
Human   541 DPFSPGVWLFMLLAYLAVSCVLFLVARLTPY-------EWY------------------------ 574

  Fly   426 ISRYRSSKGDRMPRDLFDGYTNCILLTYSM----------LLYVALPRMPRNWPLRVLTGWYWIY 480
                       .|.....|..|.::..||:          .:.......||....|.::|.:|.:
Human   575 -----------SPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRALSTRCVSGVWWAF 628

  Fly   481 CILLVATYRASFTAILANPAARVTIDTLEDLL-RSHIPPST--GATENRQFFLEANDEVARKVGE 542
            .::::::|.|:..|.|......|.|::::||. ::.|...|  |.: :..||..:..:..:::..
Human   629 TLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGTIHGGS-SMTFFQNSRYQTYQRMWN 692

  Fly   543 KM-----EVFGYS-DDLTSRIAKGQCAYY----DNEFYLRYLRVADESGSALHIMKECVLYMPVV 597
            .|     .||..| ::..:|:.....|:.    .||:|.:......:.|..|. .|...:.||| 
Human   693 YMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLD-TKGYGIGMPV- 755

  Fly   598 LAMEKNSALKPRVDASIQHLAEGG----LIAKWLKDAIEHLPAEALAQQEALMNIQKFWSSFVAL 658
                 .|..:...|.:|..|.|..    |..||.:..  ..|.|...:.:.| .::.....||.|
Human   756 -----GSVFRDEFDLAILQLQENNRLEILKRKWWEGG--KCPKEEDHRAKGL-GMENIGGIFVVL 812

  Fly   659 LIGYVISM-LTLLAERWHFKH 678
            :.|.:::: :.:|...|..:|
Human   813 ICGLIVAIFMAMLEFLWTLRH 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 367..661 CDD:459656 59/320 (18%)
GRIK4NP_055434.2 PBP1_iGluR_Kainate_KA1_2 24..402 CDD:380616 43/222 (19%)
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 91/447 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..889
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.

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