DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68a and GRIK3

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_000822.2 Gene:GRIK3 / 2899 HGNCID:4581 Length:919 Species:Homo sapiens


Alignment Length:663 Identity:133/663 - (20%)
Similarity:228/663 - (34%) Gaps:215/663 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 NVITILNGWQVQRFLGYIYDNRSLNMQKKFVLLHDLRLFESDMIHLWSVFIDAIFLKRQLDNKYT 178
            :|..|:..|.::|...   ..||.:.....|::.|..|. .|.:|:.||..       |...:.|
Human   291 HVSAIVEKWSMERLQA---APRSESGLLDGVMMTDAALL-YDAVHIVSVCY-------QRAPQMT 344

  Fly   179 ISTI--------AFPGILSGVLVMKNIANWELGKGLNGRILFADKTS------------------ 217
            ::::        .|.|.....:   ..|.||   ||.|||:| :|||                  
Human   345 VNSLQCHRHKAWRFGGRFMNFI---KEAQWE---GLTGRIVF-NKTSGLRTDFDLDIISLKEDGL 402

  Fly   218 ---------------------------NLFGTSLPVAISEHVPMVLWANATKS------FQGVEV 249
                                       :|...||.|......|.|::..:.::      |:|..:
Human   403 EKVGVWSPADGLNITEVAKGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCI 467

  Fly   250 EIMNALGKALNFKPVYYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSMLVDEVAAHS 314
            :::..|...|.|.   |:....|       ||    .||:.:..| ..||      :|.|:..|.
Human   468 DLLKELAHILGFS---YEIRLVE-------DG----KYGAQDDKG-QWNG------MVKELIDHK 511

  Fly   315 ARFAIGDLHLFQVYLKLVELSAPHNFECLTFLT--------PESSTDNSWQTFILPFSAGMWVGV 371
            |..|:..|.:..|..|.::.|.|       |:|        ..:.|:.|..:|:.|.|..:|:.|
Human   512 ADLAVAPLTITHVREKAIDFSKP-------FMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYV 569

  Fly   372 LLSLFVVGTVFYAISFLNAIINGNVSSEFFRCLRPNRNVPMDPKIYRRISFRIAISRYRSSKGDR 436
            ||:...|..|.:.|:                                |.|               
Human   570 LLAYLGVSCVLFVIA--------------------------------RFS--------------- 587

  Fly   437 MPRDLFDGY----------TNCILLT---YSM--LLYVALPRMPRNWPLRVLTGWYWIYCILLVA 486
             |.:.:|.:          .|..||.   :.|  |:......||:....|::.|.:|.:.:::::
Human   588 -PYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIIS 651

  Fly   487 TYRASFTAILANPAARVTIDTLEDLLR----SHIPPSTGATENRQFFLEANDEVARKVGEKMEVF 547
            :|.|:..|.|........||:.:||.:    .:.....|||  ..||.::      |:....:::
Human   652 SYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGAT--MTFFKKS------KISTFEKMW 708

  Fly   548 GYSDDLTSRIAKGQCAYYDNEFYLRYLRVAD-----ESGSALHI-MKECVLYMPVVLAMEK---- 602
            .:.....|.:.|      :||..::....||     ||.:..:: .:.|.|.....|...|    
Human   709 AFMSSKPSALVK------NNEEGIQRALTADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGI 767

  Fly   603 ----NSALKPRVDASIQHLAEGGLI----AKWLKDAIEHLPAEALAQQEALMNIQKFWSSFVALL 659
                .|..:.::..:|..|.|...:    .||.:.:  ..|.|...:..|| .|||....|:.|.
Human   768 GTPMGSPYRDKITIAILQLQEEDKLHIMKEKWWRGS--GCPEEENKEASAL-GIQKIGGIFIVLA 829

  Fly   660 IGYVISMLTLLAE 672
            .|.|:|:|..:.|
Human   830 AGLVLSVLVAVGE 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 53/268 (20%)
GRIK3NP_000822.2 PBP1_iGluR_Kainate_GluR5_7 34..417 CDD:107388 29/143 (20%)
ANF_receptor 55..398 CDD:279440 29/124 (23%)
PBP2_iGluR_Kainate_GluR7 433..801 CDD:270441 89/457 (19%)
Lig_chan 564..832 CDD:278489 62/332 (19%)
Glutamate binding. /evidence=ECO:0000250 690..692 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155886
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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