DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir68a and GRID2

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:XP_011530195.2 Gene:GRID2 / 2895 HGNCID:4576 Length:1035 Species:Homo sapiens


Alignment Length:512 Identity:100/512 - (19%)
Similarity:182/512 - (35%) Gaps:113/512 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 WELGKGLNGRILFADKTSNLFGTSLPVAISEHVPMVLWA----NATKSFQGVEVEIMNALGKALN 260
            |....||||.:......:|:.|..|.|......|.|:.:    ...|.:||..:::::||...|.
Human   447 WNPVTGLNGSLTDKKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKYQGFSIDVLDALSNYLG 511

  Fly   261 FK-PVYYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSMLVDEVAAHSARFAIGDLHL 324
            |. .:|..|:.               .|||...|| ..||      ||.|:....|...|..|.:
Human   512 FNYEIYVAPDH---------------KYGSPQEDG-TWNG------LVGELVFKRADIGISALTI 554

  Fly   325 FQVYLKLVELSAPHNFECLTFLTPESSTDNSWQTFILPFSAGMWVGVLLSLFVVGTVFYAISFLN 389
            ......:|:.:..:....:..|...:.........:.||...:|..:..::.:||.:.|.:::||
Human   555 TPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLLNWLN 619

  Fly   390 --AIINGNVSSEFFRCLRPNRNVPMDPKIYRRISFRIAISRYRS--SKGDRMPRDLFDGYTNCIL 450
              .:..|:::|               ..:|..:.|     .|.|  .:|..:|      ||.  |
Human   620 PPRLQMGSMTS---------------TTLYNSMWF-----VYGSFVQQGGEVP------YTT--L 656

  Fly   451 LTYSMLLYVALPRMPRNWPLRVLTGWYWIYCILLVATYRASFTAILANPAARVTIDTLEDLLR-S 514
            .|                  |::.|.:|::.::::::|.|:..|.|.......:|.:|:||.: :
Human   657 AT------------------RMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQT 703

  Fly   515 HIPPST---------------GATENRQFFLEANDEVARKVGEKMEVFGYSDDLTSRIAKGQCAY 564
            .||..|               ...|....:.:....:.|..|.:..|. .|.....::..|..|:
Human   704 EIPYGTVLDSAVYEHVRMKGLNPFERDSMYSQMWRMINRSNGSENNVL-ESQAGIQKVKYGNYAF 767

  Fly   565 YDNEFYLRYLRVADESGSALHIMKECVLYMPVVLAMEKNSALKPRVDASIQHLAEGG----LIAK 625
            ..:...|.|:.:.|...| .:.:...|......:|::..|..:......|..|.:.|    |..|
Human   768 VWDAAVLEYVAINDPDCS-FYTIGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHK 831

  Fly   626 W--------LKDAIEHLPAEALAQQEALMNIQKFWSSFVALLIGYVISMLTLLAERW 674
            |        |..:::      ..|:...::|:.|...|..|..|.|:|....:.|.|
Human   832 WWPKNGQCDLYSSVD------TKQKGGALDIKSFAGVFCILAAGIVLSCFIAMLETW 882

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 48/261 (18%)
GRID2XP_011530195.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155881
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.