DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68a and GRID1

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_060021.1 Gene:GRID1 / 2894 HGNCID:4575 Length:1009 Species:Homo sapiens


Alignment Length:525 Identity:100/525 - (19%)
Similarity:192/525 - (36%) Gaps:123/525 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 MKNIANWELGKGLNGRILFADKTSNLFGTSLPVAISEHVPMVLWA----NATKSFQGVEVEIMNA 254
            |:.:|.|:..|||||.:......|.|.|.:|.|......|.|:.|    ...|.::|..:::::|
Human   409 MRKLATWDSEKGLNGSLQERPMGSRLQGLTLKVVTVLEEPFVMVAENILGQPKRYKGFSIDVLDA 473

  Fly   255 LGKALNFK-PVYYKP-----NQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSMLVDEVAAH 313
            |.|||.|| .:|..|     :|..|..|                     ||      ::.|:.:.
Human   474 LAKALGFKYEIYQAPDGRYGHQLHNTSW---------------------NG------MIGELISK 511

  Fly   314 SARFAIGDLHLFQVYLKLVELSAPHNFECLTFLTPESSTDNSWQTFILPFSAGMWVGVLLSLFVV 378
            .|..||..:.:......:|:.|..:....:..|..:.....|..:...||...:|..:..::.||
Human   512 RADLAISAITITPERESVVDFSKRYMDYSVGILIKKPEEKISIFSLFAPFDFAVWACIAAAIPVV 576

  Fly   379 GTVFYAISFLNAIINGNVSSEFFRCLRPNRNVPMDPKIYRRISFRIAISRYRSSKGDRMPRDLFD 443
            |.:.:.::.:.|:...:.:..     ||:.:..:...|:                          
Human   577 GVLIFVLNRIQAVRAQSAAQP-----RPSASATLHSAIW-------------------------- 610

  Fly   444 GYTNCILLTYSMLLYVALPRMPRNWPLRVLTGWYWIYCILLVATYRASFTAILA-----NPAARV 503
                   :.|...:.........:..:|::.|.:|::.:::.::|.|:..|.|.     ||    
Human   611 -------IVYGAFVQQGGESSVNSMAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNP---- 664

  Fly   504 TIDTLEDLLRSHIPPSTGATENR---QFF-------LEAND---EVARKVGEKMEVFGYSDDLTS 555
             |.|.:||.: .:..|.|...:.   ::|       ||.:.   |:.|.:.:.    |.:|:..|
Human   665 -IRTFQDLSK-QVEMSYGTVRDSAVYEYFRAKGTNPLEQDSTFAELWRTISKN----GGADNCVS 723

  Fly   556 -------RIAKGQCAYYDNEFYLRYLRVADESGSALHIMKECVLYMPVVLAMEKNSALKPRVDAS 613
                   :..||..|:..:...:.|..:.|:..| :.::...:......:|::..|..:......
Human   724 SPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCS-VTVIGNSISSKGYGIALQHGSPYRDLFSQR 787

  Fly   614 IQHLAEGG----LIAKWLK-----DAIEHLPAEALAQQEALMNIQKFWSSFVALLIGYVISMLTL 669
            |..|.:.|    |..||..     |...|..|:|..:.   :.:..|...|..|.||.:::.|..
Human   788 ILELQDTGDLDVLKQKWWPHMGRCDLTSHASAQADGKS---LKLHSFAGVFCILAIGLLLACLVA 849

  Fly   670 LAERW 674
            ..|.|
Human   850 ALELW 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 45/265 (17%)
GRID1NP_060021.1 Interaction with CBLN1. /evidence=ECO:0000250|UniProtKB:Q61627 21..436 10/26 (38%)
PBP1_iGluR_delta_1 25..423 CDD:107387 6/13 (46%)
ANF_receptor 41..400 CDD:279440
PBP2_iGluR_delta_1 436..806 CDD:270448 78/445 (18%)
Lig_chan 564..841 CDD:278489 53/328 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 930..954
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155850
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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