DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68a and Ir41a

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_995744.4 Gene:Ir41a / 2768714 FlyBaseID:FBgn0040849 Length:648 Species:Drosophila melanogaster


Alignment Length:638 Identity:125/638 - (19%)
Similarity:233/638 - (36%) Gaps:147/638 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 ELFVK---AIKSSDCELNVITILNGWQVQRFLGYIYDNRSL-----NMQKKFVLLHDLRLFESDM 156
            ||.:|   :|:.:.||..|:.   ...:.||:. .::..|:     ::..|||..|.........
  Fly    80 ELVIKIIISIEVTHCETFVVF---DKDIDRFVN-AFNKASVYSIWRSLHNKFVFAHIANESPESR 140

  Fly   157 IHLWSVFIDAIFLKRQLD--NKYTISTIAFPGILSG-----VLVMKNIAN---WELGKGLNGRIL 211
            .|.:....:.:|:.|...  :.:.|.|..|.|..:.     :||.:.:|:   ::.||.     |
  Fly   141 NHFFEDQPNILFVVRDHSSASSFDIKTNKFVGRKAENPSQMILVDRYLASEQRFQFGKS-----L 200

  Fly   212 FADKTSNLFGTSLPVAISEHVPMVLWANATKSFQGVEVEIMNALGKALNFKPVYYKPNQT----- 271
            ||||.:||.|..:.:|..::.|..:    .|.......:.|...|:: :||.||....:|     
  Fly   201 FADKLNNLQGREVIIAGFDYPPYTV----IKHNMSTNAQDMGVSGES-DFKNVYIDGTETRIVLN 260

  Fly   272 --ENMDWT-ELDGGASVAYGSGNPDGYAQNGTHIDSMLVDEVAAHSARFAIGDLHLFQVYLKLVE 333
              |..:.| ::|..|:..:|...|:   .:|.....||::    ..|...||.::.:......::
  Fly   261 FCEQFNCTIQIDSSAANDWGKVYPN---MSGDGALGMLIN----RKADICIGAMYSWYEDYTYLD 318

  Fly   334 LSAPHNFECLTFLTPESSTDNSWQTFILPFSAGMWVGVLLSLFVVGT---VFYAISFLNAIINGN 395
            ||.......:|.|.|......||...:.||...:|..:||.|....|   :.|.......::.|.
  Fly   319 LSMYLVRSGITCLVPAPLRLTSWYLPLEPFKETLWAAILLCLCAEATGLVLAYKSEQALYVLPGY 383

  Fly   396 -----VSSEFFRCLRPNRNVPMDPKIYRRISFRIAISRYRSSKGDRMPRDLFDGYTNCILLTYSM 455
                 ..:.|..|                .:|::.||:..:||          .|:    ||..:
  Fly   384 REGWWTCTSFGVC----------------TTFKLFISQSGNSK----------AYS----LTVRV 418

  Fly   456 LLYVALPRMPRNWPLRVLTGWYWIYCILLVATYRASFTAILANPAARVTIDTLEDLLRSHIPPST 520
            ||:..                 ::..:::.:.|.....:||..|:.....||: ..||.|.....
  Fly   419 LLFAC-----------------FLNDLIITSIYGGGLASILTIPSMDEAADTV-TRLRFHRLQWA 465

  Fly   521 GATENRQFFLEANDE-VARKVGEKMEVFGYSDDLTSRIAKGQCAYYDNEFYLRYLRV-------- 576
            ..:|.....:.|:|| :.:.:.....:  ||||...|:|:.|           ::|:        
  Fly   466 ANSEAWVSAIRASDEALVKDILYNFHI--YSDDELLRLAQDQ-----------HMRIGFTVERLP 517

  Fly   577 ----------ADESGSALHIMKECVLYMPVVLAMEKNSALKPRVDASIQHLAEGGLIAKW-LKDA 630
                      ..::...|.|||:.:.:...|..:.:...|..:::..|......|....| .:..
  Fly   518 FGHFAIGNYLGPQAIDQLVIMKDDIYFQYTVAFVPRLWPLLDKLNTLIYSWHSSGFDKYWEYRVV 582

  Fly   631 IEHLPAEALAQ-QEAL----------MNIQKFWSSFVALLIGYVISMLTLLAE 672
            .::|..:...| ||.:          :.:..|....:..::|..|:.||.|.|
  Fly   583 ADNLNLKIQQQVQETMTGTKDIGPVPLGMSNFAGFIIVWILGSAIATLTFLLE 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 42/262 (16%)
Ir41aNP_995744.4 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462717
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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