DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68a and Ir52c

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster


Alignment Length:748 Identity:114/748 - (15%)
Similarity:240/748 - (32%) Gaps:232/748 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LWILIVAFISLAMATSIPIPIANPAPLSGYEMQLKILLQKILWVANVKRCFAVITDDLHYPIYDR 68
            :|::|:.| .|..::|..:.:.|.:.|. ::.:|..|||::    .|::.:..:.      :|  
  Fly     2 VWLIIILF-CLGNSSSQILDVTNNSHLD-FDYRLFGLLQRL----QVEKSYDTLL------VY-- 52

  Fly    69 IFFESVGRRVIPFFVMRTNESDDLQRPSRQVELFVKAIKSS------DCELNVITILNGWQVQRF 127
                                .:|...||....|.|.|:..|      |...:.:|::.....|  
  Fly    53 --------------------GEDCAIPSLFERLQVPAVLVSSGSTNFDWNFSSLTLILSCNFQ-- 95

  Fly   128 LGYIYDNR--------SLNMQKKFVLL------------------HDLRLFESDMIHLWSVFIDA 166
                 |.|        .|...::.:||                  |::.:.:.:...|..|:...
  Fly    96 -----DEREENYRTLMKLQTSRRLILLKGHIKPESVCDFYSKKEQHNVAMVKENFYQLEVVYSCR 155

  Fly   167 IFLKRQLDNKYTISTIAFPGILSGVLVMKNIANWELGKGLNGRILFADKTSNLFGTSLPVAISEH 231
            :|..:                           |:|.....:|:.::.|:..|:.|..:.....:.
  Fly   156 LFQDQ---------------------------NYEKLNLFDGKSIYKDQFRNMHGAPIRTLSDKE 193

  Fly   232 ----VPMVLWANATKSFQGVEVEIMNALGKALNFKPVYYKPNQTENMDWTELDGGASVAYGSGNP 292
                :|.:......:.|:|....:::...|         |.|.|..:....:.....|::..   
  Fly   194 PPRTIPYIDSKTGEEKFKGYVGMLISQFVK---------KVNATMQIREDLIKDDEEVSFVD--- 246

  Fly   293 DGYAQNGTHIDSMLVDEVAAHSARFAIGDLHLFQVYLKLVELSAPHNFECLTFLTPESSTDNSWQ 357
               ..|.|..|.:.:....|.:...:..|           .:|.|:......|:.|...:     
  Fly   247 ---ITNFTSNDILDIGICEARTLEMSNYD-----------AISYPYLMSSYCFMAPLPDS----- 292

  Fly   358 TFILPFSAGMWVGVLLSLFVVGTVFYAISFLNAIINGNVSSEFFRCLRPNRNVPMDPKIYRRISF 422
               ||||......|..|:.::..:.:.|..:..|.                   :..:.||.::.
  Fly   293 ---LPFSDVYMAIVAPSILIMFLIIFCICSVLIIY-------------------IQERSYRSLTI 335

  Fly   423 RIAISRYRSSKGDRMPRDLFDGYTNCILLTYSMLLYVALP-RMPR--NWPLRVLTGWYWIYCI-L 483
            |..:......:|                       ::|.| ..||  |..|:::   :.:.|. .
  Fly   336 RSVLMNDICLRG-----------------------FLAQPFPFPRQYNRKLKLI---FMLVCFSS 374

  Fly   484 LVAT--YRASFTAILANPAARVTIDTLEDLLRSHIPPSTGATENRQFFLEA-NDEVARKVGEKME 545
            |::|  |.|...|.|..|.....:.:.:|:.:|....:....|..  |||| |..:     |.:|
  Fly   375 LISTTMYTAYLQAFLWGPPIEPRLTSFDDVKKSRYTMAINIYERE--FLEALNVSL-----EDVE 432

  Fly   546 VFGYSDDLTSRIAKGQCAYYDNEFY----LRYLRVADESGSALHIMKECVLYMPVVLAMEKNSAL 606
            ::.|     .:.:|.:..:..|..:    |::..:.:|.    .:.|..:.|......:.:...|
  Fly   433 IYDY-----GKFSKLRSTFNTNYLFPVTALQWFTINEEQ----KLFKYKIFYYCDAFCLNQFDIL 488

  Fly   607 K-------PRVDASIQHL---AEGGLIAKWLKDAIEHL---------PAEALAQQEALMNIQKFW 652
            .       |..|...:|:   .|.||...|:..:...:         ....|.:.:.:.....:|
  Fly   489 SIPLRRHLPYRDIFEEHMLLQKEFGLTKYWIDQSYRDMIRANLTTFKDFSPLLENDYIEVHNLYW 553

  Fly   653 ---SSFVALLIGYVISMLTLLAERWHFKHIVMK 682
               ..||.:.:|....:|.:|....::::..:|
  Fly   554 VFTMYFVGMGMGLCFFILEILRPLRYWRNCKIK 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 44/264 (17%)
Ir52cNP_725470.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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