Sequence 1: | NP_648455.2 | Gene: | Ir68a / 39269 | FlyBaseID: | FBgn0036150 | Length: | 704 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036705.3 | Gene: | Grin2a / 24409 | RGDID: | 2737 | Length: | 1464 | Species: | Rattus norvegicus |
Alignment Length: | 470 | Identity: | 93/470 - (19%) |
---|---|---|---|
Similarity: | 167/470 - (35%) | Gaps: | 105/470 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 239 NATKSFQGVEVEIMNALGKALNFKPVYY-----KPNQTENMDWTELDGGASVAYGSGNPDGYAQN 298
Fly 299 GTHIDSMLVDEVAAHSARFAIGDLHLFQVYLKLVELSAPHNFECLTFLTPESSTDNSWQTFILPF 363
Fly 364 SAGMWVGVLLSLFVVGTVFYAISFLNAIINGNVSSEFFRCLRPNRNV-----PMDPKIYRRISFR 423
Fly 424 IAISRYRSSKGDRMPRDLFDGYTNCILLTYSMLLYVALP-RMPRNWPLRVLTGWYWIYCILLVAT 487
Fly 488 YRASFTAILANPAARVTIDTLED--LLRSH--IPP------STGATENRQFFLEANDEVARKVGE 542
Fly 543 KMEVFGYSDDLTS-RIAKGQCAYYDNEFYLRYLRVADESGSALHIMKECVLYMPV--VLAMEKNS 604
Fly 605 ALKPRVD-ASIQHLAEG---GLIAKWLKDAIEHLPAEALAQQEALMNIQKFWSSFVALLIGYVIS 665
Fly 666 MLTLLAER---WHFK 677 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir68a | NP_648455.2 | Lig_chan | 429..661 | CDD:278489 | 47/249 (19%) |
Grin2a | NP_036705.3 | PBP1_iGluR_NMDA_NR2 | 32..392 | CDD:107373 | |
PBP2_iGluR_NMDA_Nr2 | 403..802 | CDD:270436 | 84/421 (20%) | ||
HisJ | <458..>541 | CDD:223904 | 19/109 (17%) | ||
Glutamate binding. /evidence=ECO:0000269|PubMed:16281028, ECO:0007744|PDB:2A5S, ECO:0007744|PDB:2A5T, ECO:0007744|PDB:4NF4, ECO:0007744|PDB:4NF8, ECO:0007744|PDB:5I56, ECO:0007744|PDB:5I57, ECO:0007744|PDB:5I58, ECO:0007744|PDB:5I59, ECO:0007744|PDB:5JTY | 511..513 | 0/1 (0%) | |||
Lig_chan | 556..828 | CDD:278489 | 61/318 (19%) | ||
Pore-forming. /evidence=ECO:0000250|UniProtKB:B7ZSK1 | 599..620 | 5/41 (12%) |