DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir68a and ZK867.2

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_001355384.1 Gene:ZK867.2 / 191445 WormBaseID:WBGene00022829 Length:354 Species:Caenorhabditis elegans


Alignment Length:405 Identity:72/405 - (17%)
Similarity:125/405 - (30%) Gaps:163/405 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 GVEVEIMNALGKALNFKPVYYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSMLVDEV 310
            |.||||:..:.:.:..       |.|....|.:.  |....:||...:|   |.:.:..:|..: 
 Worm    28 GAEVEILKMIFRLIGV-------NYTMIDVWKKF--GQQYDFGSKQKNG---NWSGMIGLLQSD- 79

  Fly   311 AAHSARFAIGDLHLFQVYLKLVELS---APHNFECLTFLTPESSTDNSWQTFILPFSAGMWVGVL 372
                             .|.::.||   ||...|.:.|..|....:.|.|:|  |.|:.|    |
 Worm    80 -----------------QLDMIGLSMRIAPEREEVVLFSYPTRVFETSIQSF--PVSSRM----L 121

  Fly   373 LSLFVVGTVFYA-------ISFLNAIINGNVSSEFFRCLRPNRNVPMDPKIYRRISFRIAISRYR 430
            |.:.::.|.|.:       ::||:..:..::.   ||.::....:....|:|        |:.:.
 Worm   122 LLIILIATFFISQLYQTDMLAFLSVPLTYSIP---FRSIKQALELVEHQKMY--------IAAFE 175

  Fly   431 SSKGDRMPRDLFDGYTNCILLTYSMLLYVALPRMPRNWPLRVLTGWYWIYCILLVATYRASFTAI 495
            :       :.|....|.|.|...|                                        |
 Worm   176 N-------QTLLCTPTTCSLFQKS----------------------------------------I 193

  Fly   496 LANPAARVTIDT-LEDLLRSHIPPSTGATENRQFFLEANDEVARKVGEKMEVFGYSDDLTSRIAK 559
            ..||..|...|| ::||:                         :|.|.      |...:.|.:..
 Worm   194 DKNPVRRANKDTEVQDLI-------------------------KKGGI------YQSTVDSALLP 227

  Fly   560 GQCAYYDNEFYLRYLRVADESGSALHIMKECVLYMPVVLAMEKNSALKPRVDASIQHLAEGGLIA 624
            ||.::.:.:  .::|.|.||...:        .|:....:.:....||                 
 Worm   228 GQLSWLNVD--QKFLIVRDEDAPS--------YYVAFTFSKKHKKLLK----------------- 265

  Fly   625 KWLKDAIEHLPAEAL 639
            |:....||.|||.:|
 Worm   266 KFNSALIEVLPAVSL 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 33/212 (16%)
ZK867.2NP_001355384.1 Lig_chan-Glu_bd 22..77 CDD:214911 13/60 (22%)
Periplasmic_Binding_Protein_Type_2 <69..>103 CDD:389745 8/51 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.