DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68a and glr-2

DIOPT Version :9

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_001021114.1 Gene:glr-2 / 175999 WormBaseID:WBGene00001613 Length:977 Species:Caenorhabditis elegans


Alignment Length:803 Identity:150/803 - (18%)
Similarity:264/803 - (32%) Gaps:257/803 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 FAVITDDLHYPIYDRIFFESVG---RRVIPFFVMRTNE-SDDLQRP-----------SRQVELFV 103
            :.:..|:...|..:.:|.|.:.   ||:.....:::|: |:::..|           |.:...|:
 Worm   191 YQLFVDNYVAPSDEEMFKEFLNEFHRRISTQHTLKSNDSSEEIDEPIPVNVIVDLEGSYRTRAFL 255

  Fly   104 KAIKSS---DCELNVI--------TILNGWQ---VQRFLGYIYDNRSLNMQKKFVLLHDL----- 149
            :|::.|   ..|.:.:        |.|:|:.   :...:..|:|..:....|.....||:     
 Worm   256 RALEESVLVKKEYHYVFSNFDVDETDLSGFHFSLINITIFRIFDKNNKKFLKTRAEFHDVYRGGF 320

  Fly   150 ---------RLFESDMI-------------HLWSVFIDAIFLKRQLDNKYTISTIAFP------- 185
                     ..|..|.|             |...:| |..|::.||.|:........|       
 Worm   321 SNTDSIPTAAAFAHDAILVAGKALQIAMNEHGKGIF-DKSFVRHQLFNRGRKGLYCRPHEDQTES 384

  Fly   186 -------------------------GILSGVLVMKNIA--------------------------- 198
                                     |.|:|.:....:.                           
 Worm   385 RQFETFEHGKKIAEAIKKVVLTDKDGTLTGRIQFDKVTGKRTNFSAEIVEIKPGVNSLNSIWERF 449

  Fly   199 NWELGKG--LNGRILFADKTSNLFGT------SLPVAISEHVPMVL---------------WANA 240
            .|..|:|  |.|.....:|..:...|      |.|..:..:|..||               ....
 Worm   450 QWAEGEGFLLGGERYVQEKKKDSSQTRKGILPSKPWQLRFNVVTVLVKPFVMLKRRNPGEPELKG 514

  Fly   241 TKSFQGVEVEIMNALGKALNFKPVYYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSM 305
            ...|:|..::::|.|.|               |:...|.|    |....||..|..|.....|.|
 Worm   515 NDRFEGYCIDLLNLLAK---------------NITGFEYD----VFISDGNKYGSRQADGSWDGM 560

  Fly   306 ---LVDEVAAHSARFAIGDLHLFQVYLKLVELSAPHNFECLTFLT---------PESSTDNSWQT 358
               |::|    :|..|:..|.:.|...:.|:.|.|       |:|         ||....|.: :
 Worm   561 IGYLLNE----TADVAVAPLTITQERERAVDFSKP-------FMTTGISIMIKKPEKQEFNIF-S 613

  Fly   359 FILPFSAGMWVGVLLSLFVVGTVFYAISFLNAIINGNVSSEFFRCLRPNRNVPMDPKIYRRISFR 423
            |:.|....:|:..|.|.|.|....:.:|:.:                     |.:    :||.|:
 Worm   614 FMEPLGMTIWIFTLSSYFGVSLTIFLVSWFS---------------------PYE----KRIEFK 653

  Fly   424 IAISRYRSSKGDRMPRDLFDGYTNCILLTYSMLLYVALPRMPRNWPLRVLTGWYWIYCILLVATY 488
                     :|:....:.|..| |.:..|.:..:......:||....|:.:..:|.:.:::|::|
 Worm   654 ---------RGEFTVTNEFTLY-NSLWFTLAAFMQQGTDILPRAVSGRIASSCWWFFTLIIVSSY 708

  Fly   489 RASFTAILANPAARVTIDTLEDLLRS-------HIPPSTGA-------------------TENRQ 527
            .|:..|.|........|:::|||...       :...||.|                   |..:|
 Worm   709 TANLAAFLTLERMTPPIESVEDLANQNKILYGVNEGGSTAAFFEDSIVPLYKKMWNFMVSTTQKQ 773

  Fly   528 FFLEANDEVARKVGEKMEVFGYSDDLTS-RIAKGQCAYYDNEFYLRYLRVADESG-SALHIMK-- 588
            ..|| ...:......::.|..|:|.:.. |.:||:.|:...|....|     ||| .....||  
 Worm   774 IELE-KQSITNSTSNRIFVSSYADGIEKVRTSKGKYAFLLEETTNNY-----ESGRRPCDTMKVG 832

  Fly   589 ECVLYMPVVLAMEKNSALKPRVDASIQHLAEGG----LIAKWLKDAIEHLPAEALAQQEALMNIQ 649
            :.:..:...:|.:..:.|:..::.:|.:|:|.|    |..||..|..:.....:.....:.:|:.
 Worm   833 QNLNTLGYGIATKIGNPLRVSLNLAILYLSEKGELKKLENKWWYDRGQCDTGTSDGGTSSSLNLS 897

  Fly   650 KFWSSFVALLIGYVISMLTLLAE 672
            |....|..||.|.|:||.|.|.|
 Worm   898 KVAGIFYILLAGMVLSMCTALVE 920

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 54/265 (20%)
glr-2NP_001021114.1 Periplasmic_Binding_Protein_Type_1 7..453 CDD:299141 37/262 (14%)
Periplasmic_Binding_Protein_Type_2 491..875 CDD:304360 91/455 (20%)
Lig_chan 621..910 CDD:278489 64/329 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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