DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68a and gria3a

DIOPT Version :10

Sequence 1:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster
Sequence 2:XP_073805840.1 Gene:gria3a / 170452 ZFINID:ZDB-GENE-020125-5 Length:940 Species:Danio rerio


Alignment Length:768 Identity:150/768 - (19%)
Similarity:270/768 - (35%) Gaps:206/768 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 QKILWVANVKRCFAVITDDLHYPIYD--RIFFESVGRRVIPFFVMRTNESDDLQRPSRQVELFVK 104
            :|.:::.:..|.|:::...:...:.:  ::...|||..|.|....|..|..|    .||.:.|: 
Zfish   152 EKFVYLYDTDRGFSILQAIMESAVMNNWQVTARSVGNIVDPLEYRRIIEEMD----RRQEKRFL- 211

  Fly   105 AIKSSDCELNVI-TILNGWQV----QRFLGYIYDNRSL---NMQKKFVLLHDLRLFESDMIHLWS 161
                .|||:..| :||.  ||    :...||.|...:|   ||....|......:....:|:..|
Zfish   212 ----IDCEVERINSILE--QVVIAGKNSRGYHYILANLGFTNMSLDKVFSGGANITGFQIINPDS 270

  Fly   162 VFIDAIFLKR--QLDN-----------KYTISTIAFPGIL---------------------SGVL 192
            ..:.. ||:|  :||.           ||| |.:....||                     :|..
Zfish   271 PIVQQ-FLQRWERLDEREFPESRSSPLKYT-SALTHDAILVIAEAFRYLRRQRVDISRRGSAGDC 333

  Fly   193 VMKNIANWELG------------KGLNGRILFADKTSNLFG--TSLPVAISEHVP-----MVLWA 238
            :......|..|            :|:.|.|.|     :.||  ::..|.:.|..|     :..|.
Zfish   334 LANPAVPWSQGIDIERALKMVQVQGMTGNIQF-----DSFGRRSNYTVDVYEMKPGGARKIGYWN 393

  Fly   239 NATKSFQGVEVEIMNALGKALN----------FKPVYYKPN--QTENMDWTE---LDGGASVA-- 286
            ...|....||.::.|......|          ...|.||.|  |.|..|..|   :|..:.:|  
Zfish   394 EFEKFVYIVEQQVTNESSSVENRTIVVTTIMEAPYVMYKRNYMQLEGNDRYEGYCVDLASEIAKH 458

  Fly   287 --------------YGSGNPDGYAQNGTHIDSMLVDEVAAHSARFAIGDLHLFQVYLKLVELSAP 337
                          ||:.:|:....||      :|.|:....|..|:..|.:..|..::::.|.|
Zfish   459 VGIKYKLSIVADGKYGARDPETKTWNG------MVGELVYGRADIAVAPLTITLVREEVIDFSKP 517

  Fly   338 HNFECLTFL--TPESSTDNSWQTFILPFSAGMWVGVLLSLFVVGTVFYAISFLNAI---INGNVS 397
            .....::.:  .|:.|....: :|:.|.:..:|:.::.:...|..|.:.:|..:..   ::.|..
Zfish   518 FMSLGISIMIKKPQKSKPGVF-SFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLDDNEE 581

  Fly   398 SEFFRCLRPNRNVPMDPKIYRRISFRIAISRYRSSKGDRMPRDLFDGYTNCILLTYSMLLYVALP 462
            ::       :...|.||                       |.|.  |..|.:..:....:.....
Zfish   582 TK-------DPQTPPDP-----------------------PNDF--GIFNSLWFSLGAFMQQGCD 614

  Fly   463 RMPRNWPLRVLTGWYWIYCILLVATYRASFTAILANPAARVTIDTLEDLLR-SHIPPST---GAT 523
            ..||:...|::.|.:|.:.::::::|.|:..|.|........|::.|||.: :.|...|   |:|
Zfish   615 ISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGST 679

  Fly   524 ENRQFFLEANDEVARKVGEKME-----VF-GYSDDLTSRI--AKGQCAYYDNEFYLRYLRV---- 576
              ::||..:...|..|:...|:     || ..:.|..:|:  :||:.|:........|:..    
Zfish   680 --KEFFRRSKIAVYEKMWSYMKSAEPSVFVKTTPDGVARVRKSKGKFAFLLESTMNEYIEQRKPC 742

  Fly   577 --------ADESGSALHIMKECVLYMPVVLAMEKNSALKPRVDASIQHLAEGGLI----AKWLKD 629
                    .|..|..              :|..|.|||:..|:.::..|.|.||:    .||..|
Zfish   743 DTMKVGGNLDSKGYG--------------VATPKGSALRSAVNLAVLKLNEQGLLDKLKNKWWYD 793

  Fly   630 AIEHLPAEALAQQEALMNIQKFWSSFVALLIGYVI------SMLTLLAERWHF 676
            ..|.......::.:|.......|.:.:...:...:      .:|..|..:|.:
Zfish   794 KGECGSGGGDSKHKARCPTVSLWLTDIRTPVNLAVLKLSEQGILDKLKNKWWY 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68aNP_648455.2 Lig_chan 367..661 CDD:459656 60/324 (19%)
gria3aXP_073805840.1 None

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