DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ube3a and HUL5

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_011374.1 Gene:HUL5 / 852736 SGDID:S000003109 Length:910 Species:Saccharomyces cerevisiae


Alignment Length:1021 Identity:219/1021 - (21%)
Similarity:395/1021 - (38%) Gaps:228/1021 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 NANCSNANCASSGKVAPMTPNEVAARALQLFSQDAQLCEAFTSEANSPQDVDMLSPNDSSSSSSG 121
            |.|..|....|...:......|...||.....:||                     :.:...|..
Yeast    12 NVNLGNRTRNSKKDLLEKAKRERERRAQDKLKEDA---------------------SKTIQKSIR 55

  Fly   122 SSTSTITSASTTTTTSRQSQSTPA--AVVVPVSSPYLTQSVPQLD---IAGAEHSSGDSEPCTPT 181
            ...|.:.....|.|:|:.....||  ..::...|.|..|.:.:|.   ::...:|.|:.:  ..:
Yeast    56 RHFSNVRLFKNTFTSSQLVHMIPAYGGKLIYYISQYDLQQLLKLSHNFLSSYPNSLGNRQ--LLS 118

  Fly   182 LAPVH---SLDANSLIALYEQCRAADSY-DR----ICHAIGVVFSSVDRLGKSFIRSAEPAASSS 238
            |..::   :|.|.:|..|...|...|.: |.    :|.|..:.:||..:|. ..|.:.|...||:
Yeast   119 LLKLYQDDALVAETLSDLNMDCPTVDEFLDSLSVYLCRASFLSYSSASKLA-DVIEAWEVMHSSA 182

  Fly   239 LQELLANSPGALNKE----QLRTLEGEHD--KDEDSTQQV--DEQSESAANATATAESVESEAEP 295
            ...:.:.|.|:..|.    |...:..|.:  ....:|..:  |..:::.::              
Yeast   183 SISIFSISIGSYEKRPFALQFYCILAERNLLPQLINTNPILWDNMAKTYSH-------------- 233

  Fly   296 EEEDDDVCSSQSSDTLVDLPGLRRVQRLLFGCQIRAITEKLTSSVIQL-SDWVI--YMRTDWERV 357
                   ||.         .|.:.:.:||    |......:..||::. :|:|:  |.:...:.|
Yeast   234 -------CSK---------GGQKNIAKLL----IPNFNNHIAPSVLRSDNDYVLKFYEKAFIDEV 278

  Fly   358 IHCLVICFDLATNTNNSVVDMDYLDRVLPKLCQAASAMPVPAQA-----------------RLAR 405
            |          ..|.|.|.|.|::..:   :|..||:   |.|:                 ||: 
Yeast   279 I----------ATTANYVSDEDHVKNL---MCYIASS---PNQSCKNSVLITLLSNKDFVRRLS- 326

  Fly   406 IWAAH------CSDQLHSLIAACQQQITLQVLL--DEESMRENESIISVTKVLKIVFYANILASE 462
             |...      ...:.|.|.:...|.|.:.:|:  |.|.:..| |:|.:.::.|   :.:.|...
Yeast   327 -WEFFHTKFNASKTEAHPLFSVLAQLIDMHLLISTDRELLDYN-SVIPIEELKK---FTSTLKDF 386

  Fly   463 LERPSCRVPLEDRT----EAATASGSAAVED-----------------------------DLFVY 494
            ..|....:|..:|.    ||..........|                             :|..|
Yeast   387 TFRQYWELPKSERNPMLKEAVPLLSKVYERDSRLHFLSTENNPTYWENSEKQFLNLRFYEELQEY 451

  Fly   495 NSLLEPHMPKFAEDQFEKELQVSAIDCRKPLIPLEEFYNEALSENIQMHHDYLSYKTLAMESEIG 559
            ..|...|:.:.:::..|||:.   :|..:|  ||:......:.:.::   ..|.::.|.:..|: 
Yeast   452 EDLYREHLEEESDEDMEKEID---LDKERP--PLKSLLLNKMKKRLK---SSLRFRKLEILLEL- 507

  Fly   560 SGHANYFSFMLYAFILTPSTKVDALYY-----DSRMRMYSERYSSLHSILNNI---GQVGQEDNP 616
                        .|.:....:||..|.     ..|:.:..:     |:::|..   ...|.... 
Yeast   508 ------------PFFIPFEERVDLFYMFIALDKKRLSLDDD-----HNLINMFTPWASTGMRKQ- 554

  Fly   617 RPDLKLTVRRDQLINDALIGLEMVAMSNPKDLKKQLVVEFVGEQGIDEGGVSKEFFQLIVEEIF- 680
                ...:.||.::.||......:.......|....:.||..|.|||.||::|||...:.:|.| 
Yeast   555 ----SAIISRDNVLEDAFNAFNSIGERFKASLDVTFINEFGEEAGIDGGGITKEFLTTVSDEGFK 615

  Fly   681 NPAFGMFIQQEETNNMW-------FNATPFENGAQFTLIGIIIGLAIYNNVTLAVNFPMVVYRKL 738
            :|...:|    .||:.:       ::||..:   ....:|.::|..:|.:|.:.|:|.....:||
Yeast   616 DPKHELF----RTNDRYELYPSVVYDATKLK---YIWFLGKVVGKCLYEHVLIDVSFADFFLKKL 673

  Fly   739 I----GYCGTFADLSDWSPALYKSLKSMLDYQGQDMEEVFEQTFKISYSDVFGDVVQHELVPNGQ 799
            :    |:..:|:||..:...||.:|..:|:....:::.: :.||:|...:....||  :|:|||.
Yeast   674 LNYSNGFLSSFSDLGSYDSVLYNNLIKLLNMTTDEIKSL-DLTFEIDEPESSAKVV--DLIPNGS 735

  Fly   800 DVLVGQHNKELFVNLYSDFLLNTNIEQQFNAFRKGFEMVTDESPLKLLFRPEEIEMLVCGSRE-F 863
            ...|.:.|..|:|...:|:.||....:..:||..|..::.....:: :|...|::||:.|.|: .
Yeast   736 KTYVTKDNVLLYVTKVTDYKLNKRCFKPVSAFHGGLSVIIAPHWME-MFNSIELQMLISGERDNI 799

  Fly   864 DFVELENSTVYEGGYTEKSQYIQDFWSIVHAMPSEDKHKLLEFTTGSARVPVGGLKCL--RLLIT 926
            |..:|:::|.| |||.|:.|.|.|||.:::....|:|...|:|.|...:.|:.|.|.|  :..|.
Yeast   800 DLDDLKSNTEY-GGYKEEDQTIVDFWEVLNEFKFEEKLNFLKFVTSVPQAPLQGFKALDPKFGIR 863

  Fly   927 RHGPDSDRLPTSHTCFNVLLLPEYSSREKLEERLMKAINYSKGFGM 972
            ..|.:..||||:.||.|:|.||:|.::..|.|:|:.|||....|.:
Yeast   864 NAGTEKYRLPTASTCVNLLKLPDYRNKTILREKLLYAINSGARFDL 909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166 9/36 (25%)
HECTc 620..971 CDD:238033 106/365 (29%)
HECTc 647..970 CDD:214523 102/337 (30%)
HUL5NP_011374.1 HUL4 35..910 CDD:227354 214/998 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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