DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ube3a and Nedd4l

DIOPT Version :10

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_036017204.1 Gene:Nedd4l / 83814 MGIID:1933754 Length:1261 Species:Mus musculus


Alignment Length:1025 Identity:225/1025 - (21%)
Similarity:366/1025 - (35%) Gaps:359/1025 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GGGEDDQHLPGVSSASGSAAGAVGGRATPEMKRSAVRSLIKRYFHQLQSGCGNANCSNANCASSG 69
            ||||..:....:|.....|..:: ..|.|....|.|                            .
Mouse   533 GGGEGPEPWETISEEMNMAGDSL-SLALPPPPASPV----------------------------S 568

  Fly    70 KVAPMTPNEVAARALQLFSQDAQLCEAFTSEANSPQDVDMLSPNDSSSSSSGSSTSTITSASTTT 134
            :.:|...:|..:|.||:           |.::|..|         .||......:|.:.|.|.|.
Mouse   569 RTSPQELSEEVSRRLQI-----------TPDSNGEQ---------FSSLIQREPSSRLRSCSVTD 613

  Fly   135 TTSRQSQSTPAAVVVPVSSPYLTQSVPQLDIAGAEHSSGDSEPCTPTLAPVHSLDANSLIALYEQ 199
            |.:.|      |.:.|.|:|  |:......:.|.|.|       ||::|.||:  ...|.:.:|:
Mouse   614 TVAEQ------AHLPPPSTP--TRRARSSTVTGGEES-------TPSVAYVHT--TPGLPSGWEE 661

  Fly   200 CRAADSYDRICHAIGVVFSSVDRLGKSF---------------IRSAEPAASSSLQELLANSPGA 249
            .:                   |..|:::               ::.||..||.|    ..||...
Mouse   662 RK-------------------DAKGRTYYVNHNNRTTTWTRPIMQLAEDGASGS----ATNSNNH 703

  Fly   250 LNKEQLR--------------TLEGEHDKDEDSTQQVDEQSESAANATATAESVESEAEPEEEDD 300
            |.:.|:|              .|||.  ||....:.|   .::.:|..:...|..:..:|:    
Mouse   704 LVEPQIRRPRSLSSPTVTLSAPLEGA--KDSPIRRAV---KDTLSNPQSPQPSPYNSPKPQ---- 759

  Fly   301 DVCSSQSSDTLVDLPGLRRVQRLLFGCQIRAITEKLTSSVIQLSDWVIYMRTDWERVIHCLVICF 365
                                             .|:|.|         ::...||..|......|
Mouse   760 ---------------------------------HKVTQS---------FLPPGWEMRIAPNGRPF 782

  Fly   366 DLATNTNNSVVDMDYLDRVLPKLCQAASAMPVPAQARLARIWAAHCSDQLHSLIAACQQQITL-- 428
            .:..||..:..:.       |:|     ..||..:::     |:...:.|..|....:::|.|  
Mouse   783 FIDHNTKTTTWED-------PRL-----KFPVHMRSK-----ASLNPNDLGPLPPGWEERIHLDG 830

  Fly   429 ---------QVLLDEESMRENESIISVTKVLKIVFYANILASELERPSCRVPLEDRTEAATASGS 484
                     |||..|...||:                             |||            
Mouse   831 RTFYIDHSSQVLCGENDTRES-----------------------------VPL------------ 854

  Fly   485 AAVEDDLFVYNSLLEPHMPKFAEDQFE-KELQVSAIDCRKPLIPLEEFYNEALSENIQMHHDYLS 548
                     |:|.:         .|:| ..||..||  ..|.:|        .|...:..:||..
Mouse   855 ---------YDSKI---------TQWEDPRLQNPAI--TGPAVP--------YSREFKQKYDYFR 891

  Fly   549 YKTLAMESEIGSGHANYFSFMLYAFILTPSTKVDALYYDSRMRMYSERYSSLHSILNNIGQVGQE 613
             |.|...::|    .|.|...|:                 |..::.|.|..:.|:          
Mouse   892 -KKLKKPADI----PNRFEMKLH-----------------RNNIFEESYRRIMSV---------- 924

  Fly   614 DNPRPDLKLTVRRDQLINDALIGLEMVAMSNPKDLKKQLVVEFVGEQGIDEGGVSKEFFQLIVEE 678
              .|||:                           ||.:|.:||..|:|:|.|||::|:|.|:.:|
Mouse   925 --KRPDV---------------------------LKARLWIEFESEKGLDYGGVAREWFFLLSKE 960

  Fly   679 IFNPAFGMFIQQEETNNMWFNATPFENG-------AQFTLIGIIIGLAIYNNVTLAVNFPMVVYR 736
            :|||.:|:| :...|:|......| .:|       :.||.||.:.|||:::...|...|....|:
Mouse   961 MFNPYYGLF-EYSATDNYTLQINP-NSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYK 1023

  Fly   737 KLIGYCGTFADLSDWSPALYKSLKSMLDYQGQDMEEVF---EQTFKISYSDVFGDVVQHELVPNG 798
            .::|...|..|:.......|.|||.:|:....:::.:|   |:.        ||...|.:|.|||
Mouse  1024 MMLGKQITLNDMESVDSEYYNSLKWILENDPTELDLMFCIDEEN--------FGQTYQVDLKPNG 1080

  Fly   799 QDVLVGQHNKELFVNLYSDFLLNTNIEQQFNAFRKGFEMVTDESPLKL--LFRPEEIEMLVCGSR 861
            .:::|...||..:::|...:.....:::|.|||.:||   |:..|:.|  :|...|:|:|:||..
Mouse  1081 SEIMVTNENKREYIDLVIQWRFVNRVQKQMNAFLEGF---TELLPIDLIKIFDENELELLMCGLG 1142

  Fly   862 EFDFVELENSTVYEGGYTEKSQYIQDFWSIVHAMPSEDKHKLLEFTTGSARVPVGGLKCL----- 921
            :.|..:....::|:.||......||.||..|..|.:|.:.:||:|.||::|||:.|...|     
Mouse  1143 DVDVNDWRQHSIYKNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNG 1207

  Fly   922 -RLLITRHGPDSDRLPTSHTCFNVLLLPEYSSREKLEERLMKAINYSKGF 970
             :|.........::||.:|||||.|.||.|.:.|.|.|:|:.|:..::||
Mouse  1208 PQLFTIEQWGSPEKLPRAHTCFNRLDLPPYETFEDLREKLLMAVENAQGF 1257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:465173 6/53 (11%)
HECTc 620..971 CDD:238033 110/369 (30%)
Nedd4lXP_036017204.1 C2 <367..420 CDD:472691
WW 465..491 CDD:459800
WW 655..684 CDD:459800 4/47 (9%)
WW 768..798 CDD:238122 7/36 (19%)
WW 817..867 CDD:197736 16/108 (15%)
HECTc 928..1257 CDD:214523 109/368 (30%)
Blue background indicates that the domain is not in the aligned region.

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