DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ube3a and ITCH

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001244066.1 Gene:ITCH / 83737 HGNCID:13890 Length:903 Species:Homo sapiens


Alignment Length:366 Identity:116/366 - (31%)
Similarity:199/366 - (54%) Gaps:26/366 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   620 LKLTVRRDQLINDALIGLEMVAMSNPKDLKKQLVVEFVGEQGIDEGGVSKEFFQLIVEEIFNPAF 684
            :|:||.|..|..|:   .:.:...:|:||:::|.|.|.||:|:|.|||::|:|.|:..|:.||.:
Human   548 IKITVTRKTLFEDS---FQQIMSFSPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMY 609

  Fly   685 GMFIQQEETNN-MWFNATPFENG---AQFTLIGIIIGLAIYNNVTLAVNFPMVVYRKLIGYCGTF 745
            .:|....:.|. :..|...:.|.   ..|..||..|.:|:::...:...|.:..|::::......
Human   610 CLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGL 674

  Fly   746 ADLSDWSPALYKSLKSMLDYQGQDMEEV-FEQTFKISYSDVFGDVVQHELVPNGQDVLVGQHNKE 809
            .||....|..|.||   :..:..::||. .|..|.:. .::.|::..|:|.|||.::||.:.|||
Human   675 KDLESIDPEFYNSL---IWVKENNIEECDLEMYFSVD-KEILGEIKSHDLKPNGGNILVTEENKE 735

  Fly   810 LFVNLYSDFLLNTNIEQQFNAFRKGFEMVTDESPLKLLFRPEEIEMLVCGSREFDFVELENSTVY 874
            .::.:.:::.|:..:|:|..||.:||..:..:..|: .|..:|:|:|:||.:|.|..:.:...:|
Human   736 EYIRMVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQ-YFDAKELEVLLCGMQEIDLNDWQRHAIY 799

  Fly   875 EGGYTEKSQYIQDFWSIVHAMPSEDKHKLLEFTTGSARVPVGGLKCLRLLITRHGPD-------- 931
            . .|...|:.|..||..|..:.:|.:.:||:|.||:.|:||||...   |:..:||.        
Human   800 R-HYARTSKQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFAD---LMGSNGPQKFCIEKVG 860

  Fly   932 -SDRLPTSHTCFNVLLLPEYSSREKLEERLMKAINYSKGFG 971
             .:.||.||||||.|.||.|.|.|:|:|:|:.||..::|||
Human   861 KENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFG 901

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166
HECTc 620..971 CDD:238033 114/364 (31%)
HECTc 647..970 CDD:214523 106/336 (32%)
ITCHNP_001244066.1 C2_E3_ubiquitin_ligase 17..140 CDD:175988
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..301
WW 328..357 CDD:306827
HUL4 <359..903 CDD:227354 116/366 (32%)
Required for interaction with FYN. /evidence=ECO:0000269|PubMed:16387660 395..471
MAP kinase docking site. /evidence=ECO:0000250 574..583 3/8 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.