DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ube3a and AT5G16040

DIOPT Version :10

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_197108.1 Gene:AT5G16040 / 831461 AraportID:AT5G16040 Length:396 Species:Arabidopsis thaliana


Alignment Length:256 Identity:50/256 - (19%)
Similarity:81/256 - (31%) Gaps:81/256 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GGGEDDQHLPGVSSASGSAA-----------GAVGG--------------------RAT----PE 34
            |.|||.|...|.......|:           ..|||                    |.|    ||
plant    11 GSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPE 75

  Fly    35 MKRSAVRSLIKRYFHQ--LQSGCGNANCSNANCASSGKVAPMTPNEVAARALQLFSQDAQLCEAF 97
            .|..:..||:|...:.  :|:..|..:|...:  ..|:......||        :.|..:  |..
plant    76 TKTESTPSLVKSLANVKIVQAAIGGWHCLAVD--DQGRAYAWGGNE--------YGQCGE--EPS 128

  Fly    98 TSEANSPQDVDMLSPNDSSSS------SSGSSTSTITSASTTTTTSRQSQSTPAAVVVPVSSPYL 156
            ..|...|...|::.|...:..      ::|.:.|.:.:......|  ..|..|...:..:|.|..
plant   129 KDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWT--WGQPWPPGDIKQISVPVR 191

  Fly   157 TQSVP--QLDIAGAEHS---------------------SGDSEPCTPTLAPVHSLDANSLI 194
            .|.:.  :|...||.|:                     :||::|.:..: ||..||..:|:
plant   192 VQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPI-PVQGLDDLTLV 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:465173 10/55 (18%)
HECTc 620..971 CDD:238033
AT5G16040NP_197108.1 ATS1 6..345 CDD:444065 50/256 (20%)
RCC1 320..385 CDD:395335
Blue background indicates that the domain is not in the aligned region.

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