DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ube3a and Hectd3

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_780453.1 Gene:Hectd3 / 76608 MGIID:1923858 Length:861 Species:Mus musculus


Alignment Length:892 Identity:182/892 - (20%)
Similarity:303/892 - (33%) Gaps:286/892 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 RLGKSFIRSAEPAASSSLQELLANSPG---ALNKEQLRTLEGEHDKD---EDSTQQVDEQSESAA 280
            |..:..|.....|...:..|.|.|..|   .|.||||    .||..|   ::....|...:|..|
Mouse    90 RAARDSIELRRGACVRTTGEELCNGHGLWVKLTKEQL----AEHLSDCSLDEGWLLVCRPAEGGA 150

  Fly   281 NATATAESVESEAEPEEEDDDVCSSQSSDTLVDLPGLRRVQRLLFGCQIRAITEKLTSSVIQLSD 345
            ....                           :|.|...:.|:.|||...|.:..           
Mouse   151 RLVP---------------------------IDTPDHLQRQQQLFGVDYRPVLR----------- 177

  Fly   346 WVIYMRTDWERVIHCLVICFDLATNTNNSVVDMDYLDRVLPKLCQAASAMPVPAQA------RLA 404
                    ||:                  |||:.|..|:        .:.|.||:|      ||.
Mouse   178 --------WEQ------------------VVDLTYSHRL--------GSRPQPAEAYTEAIQRLL 208

  Fly   405 RI---WAAHC-SDQLHSL----------------------IAACQQQITLQVLLDEESMRENESI 443
            .:   |...| .|.:|.|                      :::..::..:..|.|..:....||.
Mouse   209 YVPPTWTYECDEDLIHFLYDHLGKEDENLGSVKQYVESIDVSSYTEEFNVSCLTDSNADTYWESD 273

  Fly   444 IS---------------VTKVL-------------KIVFYANILASELERPSCRVPLEDRTEAAT 480
            .|               |.|:|             ::|.|.. ....|::      |.|.....|
Mouse   274 GSQCQHWVRLTMKKGTIVKKLLLTVDTTDDNFMPKRVVVYGG-EGDNLKK------LSDVNIDET 331

  Fly   481 ASGSAAVEDDLFVYNSLLEPHMPKFAEDQFEKELQVSAIDCRKPLIPLEEFYNEALSENIQMHHD 545
            ..|...|.:|:.|       |:|         .:::..::||              .:.|.:...
Mouse   332 LIGDVCVLEDMTV-------HLP---------IIEIRIVECR--------------DDGIDVRLR 366

  Fly   546 YLSYKTLAMESEIGSGHANYFSFMLYAFILTPSTKVDALYYDSRMRMYSERY-----SSLHSIL- 604
            .:..|: :.:.|:|.....:....|..:.....|..:.||   |..:..:|:     |.||.:: 
Mouse   367 GVKIKS-SRQRELGLNADLFQPASLVRYPRLEGTDPEVLY---RRAVLLQRFIKILDSVLHHLVP 427

  Fly   605 ---NNIGQVGQEDNPRPDLKLTVRRDQLINDALIGLE--------------MVAMSN-------- 644
               :.:|...:....:..|.|:.:|..|:...|...|              .:||.:        
Mouse   428 AWDHTLGTFSEIKQVKQFLLLSRQRPSLVAQCLRDSESSKPSFMPRLYINRRLAMEHRACPSRDP 492

  Fly   645 ---------------PKD-LKKQL------------VVEFVGEQGIDEGGVSKEFFQLIVEEIFN 681
                           |.| .:|.|            ..:|:.|..||:||..::....:.||:..
Mouse   493 ACKNAVFTQVYEGLKPSDKYEKPLDYRWPMRYDQWWECKFIAEGIIDQGGGFRDSLADMSEELCP 557

  Fly   682 ---------PAFGMFIQQ----EETNNMWFNATPFENGAQFTLIGIIIGLAIYNNVTLAVNFPMV 733
                     |.|.....|    .|..:|:.......:.|::..||.::|.|:.....|.:..|..
Mouse   558 SSADTPVPLPFFVRTANQGNGTGEARDMYVPNPSCRDFAKYEWIGQLMGAALRGKEFLVLALPGF 622

  Fly   734 VYRKLIGYCGTFADLSDWS---PALYKSLKSMLD-YQGQDMEEVFEQTF--KISYSDVFGDVVQH 792
            |:::|.|      :...||   ||:...|..:|: .:|.| :|.||..|  :::::.|..|....
Mouse   623 VWKQLSG------EEVSWSKDFPAVDSVLVKLLEVMEGVD-KETFEFKFGKELTFTTVLSDQQVV 680

  Fly   793 ELVPNGQDVLVGQHNKELFVNLYSDFLLNTNIEQQFNAFRKGFEMVTDESPLKLLFRPEEIEMLV 857
            ||:|.|..::|...::..|:.|.....|..: ::|..|.:.|...|..::.|.|| ..:|:|..|
Mouse   681 ELIPGGTGIVVEYEDRSRFIQLVRKARLEES-KEQVAAMQAGLLKVVPQAVLDLL-TWQELEKKV 743

  Fly   858 CGSREFDFVELENSTVYEGGYTEKSQYIQDFWSIVHAMPSEDKHKLLEFTTGSARVPVGGLKCLR 922
            ||..|.....|...|.:| .:......:|.||..::...:||:.:.|.|.||.:|:|.      |
Mouse   744 CGDPEVTVDALRKLTRFE-DFEPSDTRVQYFWEALNNFTNEDRSRFLRFVTGRSRLPA------R 801

  Fly   923 LLITRHGPD------SDRLPTSHTCFNVLLLPEYSSREKLEERLMKA 963
            :.|.   ||      :|.||.|.||.:.|.||.|:|.:..||:|..|
Mouse   802 IYIY---PDKLGYETTDALPESSTCSSTLFLPHYASAKVCEEKLRYA 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166
HECTc 620..971 CDD:238033 103/419 (25%)
HECTc 647..970 CDD:214523 94/355 (26%)
Hectd3NP_780453.1 APC10-HECTD3 238..371 CDD:176487 23/169 (14%)
HECTc 528..849 CDD:214523 91/337 (27%)
HECT 586..845 CDD:279026 77/277 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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