DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ube3a and Smurf1

DIOPT Version :10

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_006504947.1 Gene:Smurf1 / 75788 MGIID:1923038 Length:757 Species:Mus musculus


Alignment Length:614 Identity:155/614 - (25%)
Similarity:269/614 - (43%) Gaps:163/614 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   458 ILASELERPSCRVPL-------------------EDRT---------------------EAATAS 482
            :|...|..|..|.||                   |.||                     ...:..
Mouse   207 LLVQRLRNPEVRGPLQTPQNRPHGHQSPELPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPSPL 271

  Fly   483 GSAAVEDDLFVYNSLLEPHMPKFAEDQFEKELQVSAIDCRK--PLIPLEEFYNEALSENIQMHHD 545
            |:....|:.|:|..||:.|.        .:...:::::|.:  ||.|..|..:            
Mouse   272 GTIPGGDEAFLYEFLLQGHT--------SEPRDLNSVNCDELGPLPPGWEVRS------------ 316

  Fly   546 YLSYKTLAMESEIGSGHANYFSFMLYAFILTPSTKVDALYYDSRMRMYSERYSSLHSILN----- 605
                                          |.|.::..:.:::|...:::  ..||.|:|     
Mouse   317 ------------------------------TVSGRIYFVDHNNRTTQFTD--PRLHHIMNHQCQL 349

  Fly   606 ----------NIGQVGQEDNP---------------RPDL----------KLTVRRDQLINDALI 635
                      :.|.|..|:.|               |.:|          ::.|.|:::..::  
Mouse   350 KEPSQPLQLPSEGSVEDEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEES-- 412

  Fly   636 GLEMVAMSNPKDLKKQLVVEFVGEQGIDEGGVSKEFFQLIVEEIFNPAFGMFIQQEETNNMW--- 697
             ...:....||||||:|:|:|.||:|:|.|||::|:..|:..|:.||.:|:|  |..|:|::   
Mouse   413 -YRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLF--QYSTDNIYTLQ 474

  Fly   698 ----FNATPFENGAQFTLIGIIIGLAIYNNVTLAVNFPMVVYRKLIGYCGTFADLSDWSPALYKS 758
                .:..| ::.:.|..:|.|:|||:::...:...|.:..|::|:|.....:||....|.|:||
Mouse   475 INPDSSINP-DHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKS 538

  Fly   759 LKSMLDYQGQDMEEVFEQTFKISYSDVFGDVVQHELVPNGQDVLVGQHNKELFVNLYSDFLLNTN 823
            |..:|:   .|:..|.:.||.:.: :.||.::||||.|||::|.|.:.||:.:|.||.::.....
Mouse   539 LVWILE---NDITPVLDHTFCVEH-NAFGRILQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRG 599

  Fly   824 IEQQFNAFRKGFEMVTDESPLKLLFRPEEIEMLVCGSREFDFVELENSTVYEGGYTEKSQYIQDF 888
            ||.||.|.:|||..:..:..|| .|..:|:|:::.|..:.|..:.:::|..:....: |..::.|
Mouse   600 IEAQFLALQKGFNELIPQHLLK-PFDQKELELIIGGLDKIDLNDWKSNTRLKHCVAD-SNIVRWF 662

  Fly   889 WSIVHAMPSEDKHKLLEFTTGSARVPVGGLKCLRLLITRHGP----------DSDRLPTSHTCFN 943
            |..|.....|.:.:||:|.|||.|||:.|.|.|:......||          ::|.||.:|||||
Mouse   663 WQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFN 727

  Fly   944 VLLLPEYSSREKLEERLMKAINYSKGFGM 972
            .:.:|.|.|.|||.|:|:.|:..:.||.:
Mouse   728 RIDIPPYESYEKLYEKLLTAVEETCGFAV 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:465173
HECTc 620..971 CDD:238033 121/377 (32%)
Smurf1XP_006504947.1 C2_Smurf-like 14..138 CDD:176028
WW 236..267 CDD:197736 3/30 (10%)
WW 307..339 CDD:197736 7/75 (9%)
HECTc 399..754 CDD:238033 119/366 (33%)
Blue background indicates that the domain is not in the aligned region.

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