DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ube3a and hace1

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_012818577.2 Gene:hace1 / 734146 XenbaseID:XB-GENE-5757512 Length:1012 Species:Xenopus tropicalis


Alignment Length:1042 Identity:235/1042 - (22%)
Similarity:391/1042 - (37%) Gaps:275/1042 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 IKRYFHQLQSGCGNANC--------SNANCASSGKVAPMTPNEVAAR--------ALQLFSQDAQ 92
            :||....:.:.||:..|        ::.|...   ::..||..:|||        .|..::.|..
 Frog   132 VKRSLLHIAANCGSVECLVLLLKRGADPNYQD---ISGCTPLHLAARNGQKKCMSKLLEYNADVN 193

  Fly    93 LC--EAFTSEANSPQDVDMLSPNDSSSSSSGSSTSTITSASTTTTTSRQSQSTPAAVVVPVSSPY 155
            :|  |..|:       :..|:.|        ..|..:..                          
 Frog   194 ICNNEGLTA-------IHWLAVN--------GRTELLHD-------------------------- 217

  Fly   156 LTQSVPQLDIAGAEHSSGDSEPCTPTLAPVHSLDANSLIALYEQCRAADSYDRICHAIGVVFSSV 220
            |.|.|..:|:.                      ||....||:..|:.......:|    ::.|..
 Frog   218 LVQHVTNVDVE----------------------DAMGQTALHVACQNGHKTTVLC----LLDSGA 256

  Fly   221 DRLGKSFIRSAEPAASSSLQELLANSPGALNKEQLRTLEG-EHDKDEDSTQQVDEQSESAANATA 284
            | :.:..:..|.|.       ..|.|.|..:..|:..|.| ::..|::....:|...:.....|.
 Frog   257 D-INRPNVSGATPL-------YFACSHGQRDTAQILLLRGAKYLPDKNGVTPLDLCVQGGYGETC 313

  Fly   285 TAESVESEAEPE--------EEDDDVCSSQSSDTLVDLPGLRRVQRLLFGCQIRAITEKLTSSVI 341
               .:..:..|.        .:::|:..:.....|..|.....||.|..   :..:.|..|::..
 Frog   314 ---DILIQHHPRLFQTLIQMTQNEDLRENTLRQVLEHLSQQSEVQYLKI---LTGLAEVATTNGH 372

  Fly   342 QL----SDWVIYMRTDWERVIHCLVICFDLATNTNNSVVDMDYLDRVLPK--------------- 387
            :|    |.:...|:: ..|::......|.:..::.|:..||.|.....|:               
 Frog   373 KLLSISSSYEAQMKS-LLRIVRIFCHVFRIGPSSPNNGNDMGYNGNKTPRNQVFKVRNVYDVFRK 436

  Fly   388 -------------LCQAASAMPVPAQARLARIWAAHCSDQLHSLIA-------------AC---- 422
                         :.||.|     .|..|..:|  |..|:...|||             ||    
 Frog   437 INIKEMNLPNHTLIYQATS-----EQDPLELLW--HSLDEWLVLIATELTKNKRDSSNIACILLK 494

  Fly   423 -----QQQITL--QVLLDEESMRENESIISVTKVLKIVFYANILASELERPSC-----RVPLEDR 475
                 ||.|:|  |..:.|....::.|  |.|:           |.:.|  ||     :.|:.|.
 Frog   495 QNQLDQQDISLAHQSAIGESGSYDHLS--SSTR-----------AEDFE--SCSAAGKQEPVADG 544

  Fly   476 TE--AATASGSAAVEDDLFVYNSLLEPH---MPKFAEDQFEKELQVSAIDCRKPLIPLEEFYNEA 535
            .:  :.||:..:||....::..|...|.   .|:|.|...:.:..:.....|.|.|..:.|:   
 Frog   545 QDVISMTANRLSAVIQAFYMCCSCQMPQGMTSPRFIEFVCKHDDVLKCFVTRNPKIIFDHFH--- 606

  Fly   536 LSENIQMHHDYLSYKTLAMESEIGSGHANYFSFMLYAFILTPSTKVDALYYDSRMRMYSERYSSL 600
                                                 |:|.....:....:..:.:.:.||....
 Frog   607 -------------------------------------FLLECPELMSRFMHIIKAQPFKERCEWF 634

  Fly   601 HSILNNIGQVGQEDNP---RP----DLKLTVRRDQLINDALIGLEMVAMSNPKDLKKQLVVEFVG 658
            :..|    ..||.|:.   ||    |: |.|.||.:...:   .|:|..||.:.||:.:.|.|.|
 Frog   635 YEHL----LAGQPDSDMVHRPVNENDI-LLVHRDSIFRSS---CEVVFKSNCEKLKQGIAVRFHG 691

  Fly   659 EQGIDEGGVSKEFFQLIVEEIFNPAFGMFIQQEETNNMWFNATPFENGAQ---FTLIGIIIGLAI 720
            |:|:.: ||.:|:|.::..||.||.:.:|.|..:......|:....|...   |...|.|:|||:
 Frog   692 EEGMGQ-GVVREWFDILSSEIINPDYALFTQSADGTTFQPNSNSSVNPDHLNYFRFAGEILGLAL 755

  Fly   721 YNNVTLAVNFPMVVYRKLIGYCGTFADLSDWSPALYKSLKSMLDYQGQDMEEVFEQTFKISYSDV 785
            |:...:.:.|....|:.::|....:.|::...|...|:|:.:||....|:.  .|.||.:. :||
 Frog   756 YHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLG--LELTFSVE-TDV 817

  Fly   786 FGDVVQHELVPNGQDVLVGQHNKELFVNLYSDFLLNTNIEQQFNAFRKGFEMVTDESPLKLLFRP 850
            ||.:.:..|.|.|..:||.|.||..:|.|.::..:...|:.|.|.|.:||.|....|.:: ||..
 Frog   818 FGAMEEVPLKPGGASILVTQENKAEYVQLVTELRMTRAIQPQINGFLQGFHMFIPPSLIQ-LFDE 881

  Fly   851 EEIEMLVCGSREFDFVELENSTVYEGGYTEKSQYIQDFWSIVHAMPSEDKHKLLEFTTGSARVPV 915
            .|:|:|:.|..|.|..:...:|.|..||....|.||.||.:|..:..|::..||:|.|||:|||.
 Frog   882 YELELLLSGMPEIDVNDWMKNTEYTSGYERDDQVIQWFWEVVQELTQEERVLLLQFVTGSSRVPH 946

  Fly   916 G---------GLKCLRLLITRHGPDSDRLPTSHTCFNVLLLPEYSSREKLEERLMKAINY-SKGF 970
            |         ||:...:....:.|  :.||||.||.|:|.||||.|:|.|::||:.|::. |.|:
 Frog   947 GGFAYIMGGSGLQNFTIAAVAYTP--NLLPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGY 1009

  Fly   971 GM 972
            .|
 Frog  1010 TM 1011

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166 13/65 (20%)
HECTc 620..971 CDD:238033 121/363 (33%)
HECTc 647..970 CDD:214523 112/335 (33%)
hace1XP_012818577.2 PLN03192 <19..289 CDD:215625 38/234 (16%)
ANK repeat 134..163 CDD:293786 5/28 (18%)
ANKYR <160..288 CDD:223738 33/205 (16%)
ANK repeat 165..196 CDD:293786 7/30 (23%)
ANK repeat 198..229 CDD:293786 9/93 (10%)
ANK repeat 231..262 CDD:293786 6/35 (17%)
ANK repeat 264..289 CDD:293786 7/31 (23%)
HECTc 657..1006 CDD:238033 119/359 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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