DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ube3a and Huwe1

DIOPT Version :10

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_006528996.1 Gene:Huwe1 / 59026 MGIID:1926884 Length:4456 Species:Mus musculus


Alignment Length:1182 Identity:260/1182 - (21%)
Similarity:444/1182 - (37%) Gaps:325/1182 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GGGGEDDQHLPGVSSASGSAAGAVGGRATPEMKRSAVRSLI------------------------ 44
            ||....::|     ::|||.. .:..:|.|.:.|..:.:||                        
Mouse  3386 GGRKHTEKH-----ASSGSTV-HIHPQAAPVVCRHVLDTLIQLAKVFPSHFTQQRTKETNCESDR 3444

  Fly    45 KRYFHQLQSGCGNANCSNANC---------------------------ASSGKVAPMTPNEVAAR 82
            :|...|..|.|.:.:.|:..|                           .|||.....:|:.:.|.
Mouse  3445 ERGSKQACSPCSSQSSSSGICTDFWDLLVKLDNMNVSRKGKNSVKSVPVSSGGEGETSPHSLEAS 3509

  Fly    83 AL-QLFS--------QDAQLCE------AFTSEANSPQDVDMLSPNDSSSSSSGSSTSTITSAST 132
            .| ||.:        :.:.|.|      :..|.|.....|..:..|.|:|.||.::||..::.:|
Mouse  3510 PLGQLMNMLSHPVIRRSSLLTEKLLRLLSLISIALPENKVSEVQTNSSNSGSSTAATSNTSTTTT 3574

  Fly   133 TTTTSRQSQSTPAAVVVPVSSPYLTQSVPQLDIAGAEHS---SGDSEPCTPTLAPV--------- 185
            ||||:.....||.|...||:      |.|.|..|.|..:   :..:...|||.|..         
Mouse  3575 TTTTATAPTPTPPAATTPVT------SAPALVAATAISTITVAASTTVTTPTTATTTVSTSTTKG 3633

  Fly   186 -------------------------------------HSLD-------ANSLIALYEQCRAADSY 206
                                                 ||..       ||.|:    |....||.
Mouse  3634 SKSPAKVGEGGSGIDFKMVSSGLTENQLQLSVEVLTSHSCSEEGLEDAANVLL----QLSRGDSG 3694

  Fly   207 DR-----------------ICHAIGVVFSSVDRLGKSFIRSAEPAASSSLQELLANSPGALNKEQ 254
            .|                 :|..||.:.:.:........|.|:       .|.|  ||..|.:||
Mouse  3695 TRDTVLKLLLNGARHLGYTLCKQIGTLLAELREYNLEQQRRAQ-------CETL--SPDGLPEEQ 3750

  Fly   255 LRT--LEGEHDKDEDSTQQVDEQSESAANATATAESVESEAEP---EEEDDDVCSSQSSDTLVDL 314
            .:|  |:|          ::..:.:.|.|....|    |:..|   .|......|..:|.|....
Mouse  3751 PQTTKLKG----------KMQSRFDMAENVVIVA----SQKRPLGGRELQLPSMSMLTSKTSTQK 3801

  Fly   315 PGLRRVQRLLFGCQIRAITEK---------------------LTSSVIQL---SDWVIYMRTDWE 355
            ..||.:|.::   |:|..|.:                     :.::|.||   :|.:|.|..:.:
Mouse  3802 FFLRVLQVII---QLRDDTRRANKKAKQTGRLGSSGLGSASSIQAAVRQLEAEADAIIQMVREGQ 3863

  Fly   356 RVIHCLVICFDLATNTNNSVV-----DMDYLDRVLPKLCQAASAM-----------------PVP 398
            |...........::|.:.:.|     .|| :|:..|......|.:                 .:|
Mouse  3864 RARRQQQAATSESSNQSETSVRREESPMD-VDQPSPSAQDTQSIVISDGTPQGEKEKEEKPPELP 3927

  Fly   399 AQARLARIWAAHCSDQLHSLIAACQQQITLQVLLDEESMRENESIISVTKVLKIVFYANILASEL 463
            ..:....:      |:|..::..|.:::       ||| .:..:::    ||:....|..|....
Mouse  3928 LLSEQLSL------DELWDMLGECLKEL-------EES-HDQHAVL----VLQPAVEAFFLVHAT 3974

  Fly   464 ERPSCRVPLEDRTEAATASGSAAVEDDLFVYN-SLLEPHMPKFAEDQFEKELQVSAIDCRKP--- 524
            ||.| :.|:.|..|    |..|.::|:....: :.|.|..|...:..|.:|.....|....|   
Mouse  3975 ERES-KPPVRDTRE----SQLAHIKDEPPPLSPAPLTPATPSSLDPFFSREPSSMHISSSLPPDT 4034

  Fly   525 --LIPLEEFYNEALSENIQMHHDYLSYKTLAMESEIGSGHANYFSFMLYAFILTPSTKVDALYYD 587
              .:...|.:...|::.::....:|:....|                    :|....:|  |.:|
Mouse  4035 QKFLRFAETHRTVLNQILRQSTTHLADGPFA--------------------VLVDYIRV--LDFD 4077

  Fly   588 SRMRMYSERYSSLHSILNNIGQVGQEDNPRPDLKLTVRRDQLINDALIGLEMVAMSNPKDLKKQL 652
            .:.:.:.:....|           .|...:.|:.:.||||.:..|:...|.   ..:|:::|.:|
Mouse  4078 VKRKYFRQELERL-----------DEGLRKEDMAVHVRRDHVFEDSYRELH---RKSPEEMKNRL 4128

  Fly   653 VVEFVGEQGIDEGGVSKEFFQLIVEEIFNPAFGMFIQQEETNNMWFNATPFENG-----AQFTLI 712
            .:.|.||:|.|.||:.:|::.:|..|:|||.:.:| :....:.:.:...|..:.     :.|..:
Mouse  4129 YIVFEGEEGQDAGGLLREWYMIISREMFNPMYALF-RTSPGDRVTYTINPSSHCNPNHLSYFKFV 4192

  Fly   713 GIIIGLAIYNNVTLAVNFPMVVYRKLIGYCGTFADLSDWSPALYKSLKSMLDYQGQDMEEV-FEQ 776
            |.|:..|:|:|..|...|....|:.::|....:.|:.......|:.|..:|:   .|:..: ::.
Mouse  4193 GRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLE---NDVSTLGYDL 4254

  Fly   777 TFKISYSDVFGDVVQHELVPNGQDVLVGQHNKELFVNLYSDFLLNTNIEQQFNAFRKGF-EMVTD 840
            ||.....: ||.....:|.|||.::||.:.||:.:|:|.....:...|.:|..||.:|| |::  
Mouse  4255 TFSTEVQE-FGVCEVRDLKPNGANILVTEENKKEYVHLVCQMRMTGAIRKQLAAFLEGFYEII-- 4316

  Fly   841 ESPLKL--LFRPEEIEMLVCGSREFDFVELENSTVYEGGYTEKSQYIQDFWSIVHAMPSEDKHKL 903
              |.:|  :|..:|:|:|:.|....|..:|:::|.|. .|...|..||.||..:.:....|:.|.
Mouse  4317 --PKRLISIFTEQELELLISGLPTIDIDDLKSNTEYH-KYQSNSIQIQWFWRALRSFDQADRAKF 4378

  Fly   904 LEFTTGSARVPVGGLKCL-------RLLITRHGPDSDRLPTSHTCFNVLLLPEYSSREKLEERLM 961
            |:|.||:::||:.|...|       :..|.|....:||||::|||||.|.||.|.|.|||...|:
Mouse  4379 LQFVTGTSKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLL 4443

  Fly   962 KAI-NYSKGFGM 972
            .|| ..|:|||:
Mouse  4444 LAIQECSEGFGL 4455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:465173 16/113 (14%)
HECTc 620..971 CDD:238033 111/367 (30%)
Huwe1XP_006528996.1 DUF908 92..367 CDD:428721
DUF913 431..892 CDD:461803
UBA_HUWE1 1395..1434 CDD:270474
WWE 1695..1756 CDD:460715
UBM 3044..3071 CDD:464159
UBM 3089..3122 CDD:464159
HECTc 4101..4454 CDD:238033 111/365 (30%)
Blue background indicates that the domain is not in the aligned region.

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