DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ube3a and hecw1b

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_021336549.1 Gene:hecw1b / 563730 ZFINID:ZDB-GENE-060503-2 Length:1555 Species:Danio rerio


Alignment Length:1072 Identity:256/1072 - (23%)
Similarity:414/1072 - (38%) Gaps:247/1072 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QHLPGVSSASGSAAGAVGGRATPEMKRSAVRSLIKRYFHQLQSGCGNANCSNANCASSGKVAPMT 75
            |.|.|.....| |.|..|.:.:|::...|               |    ||:.:..:||.:    
Zfish   620 QMLDGDGHPLG-AEGQTGNQRSPDLSPVA---------------C----CSHMSPRASGPI---- 660

  Fly    76 PNEVAARALQLFSQDAQLCEAFTSEANSPQDVDMLSPNDSSSSSSGSSTSTITSASTTT--TTSR 138
                  ||..|.|  |:..|:....:...:| :|..||    ...||.|.|...|....  ..|.
Zfish   661 ------RAQSLDS--ARRSESTVFSSQDDED-EMEQPN----GILGSETETEQGAQCREPGDGSC 712

  Fly   139 QSQSTPAAVVVPVSSPYLTQSVPQLDIAGAEHSSGDSE---PCT-------PTLAPVHSLDANSL 193
            |.:..|.:   .|.||:  ..|...::||   .||..|   ||.       |.|.|    |.:..
Zfish   713 QWEEAPDS---HVQSPH--GIVGNGEVAG---PSGRRECPLPCNHPAVSQLPALRP----DPHHY 765

  Fly   194 IALYE------QCRAADSYDRICHAIGVVFSSVDRLGKSFIRSAEPAASSSLQELLANSPGALNK 252
            ..:.|      :.| .||:.|:.:        ||.:.::  .:.:...|::..:.|..|......
Zfish   766 PTIDEPLPPNWEAR-IDSHGRVFY--------VDHINRT--TTWQRPTSAATPDGLRRSGSVQQM 819

  Fly   253 EQL--------RTLEGEHDKDEDSTQQVDEQSESAAN-ATATAESVESEAEPEEEDDDVCSSQSS 308
            |||        ||:         :|::.:|:|.|..| .||..|:.......|...|..||    
Zfish   820 EQLNRRYQTIQRTM---------ATERREEESGSPRNDRTANTETDSPLQTNELRRDTSCS---- 871

  Fly   309 DTLVDLPG-LRRVQRLLFGCQIRAITEKLTSSVIQ--------------LSDWVIYMRTD---WE 355
                  || .:::..||....::.||.....:|:.              |...|:.:|.|   :|
Zfish   872 ------PGHCQKITLLLQSPAVKFITHPEFFTVLHANYGAYRMFTNSSCLKHMVLKIRRDARNFE 930

  Fly   356 RVIHCLVICFDLATNTNNSVVDMDYLDRVLPKLCQAASAMPVPAQARLARIWAAHCSDQLHSLIA 420
            |..|            |..:|  .:|:|.            ..||..|.|.|......|..|...
Zfish   931 RYQH------------NRDLV--TFLNRF------------ADAQLELPRGWEIKTDPQGKSFFV 969

  Fly   421 ACQQQITLQVLLDEESMREN----ESIISVTKVLKIVFYANILASE---------LERPSCRVPL 472
            ....:.|  ..:|.....:|    ..:.....:.::..|:...|||         |.||...:..
Zfish   970 DHNSRAT--TFIDPRIPLQNGRLPNHLTHRQHLQRLRSYSAGEASEVSRTRGVSLLARPGNSLVA 1032

  Fly   473 EDRTEAATASGSAAVEDDLFVY------NSLLEPHMPKFAEDQFEKE----------LQVSAIDC 521
            ..|.::.......|..|.:..:      ..:|:...|.||.:...|:          .::..:.|
Zfish  1033 AIRNQSQQEPVPLAYNDKIVAFLRQPNIFEVLQERQPSFARNHSLKDKVHHIRTEGTQRLEKLSC 1097

  Fly   522 RKPLIPLEEFYNEALSENIQMHHDYLSYKTLAM---------ESEIGSGHANYFSFMLYAFIL-- 575
            ...|:.|...:.|          |.:||..||.         ....||...|...|:....::  
Zfish  1098 DADLVMLLSLFEE----------DIMSYVPLASFHPGFNFSPRCSPGSSPQNSPGFLERTPLVPA 1152

  Fly   576 -------TPST---KVDALY---YDSRMRMYSERYSSLHSILNNIGQVGQEDNPRPDLKLTVRRD 627
                   :|.|   :..|.|   :::::|.:   |..|.:       .|....| ..:||.||||
Zfish  1153 CCLSGESSPGTQRARAPAPYRRDFEAKLRNF---YRKLEA-------KGYGQGP-GKIKLIVRRD 1206

  Fly   628 QLINDALIGLEMVAMSNPKDLKKQLVVEFVGEQGIDEGGVSKEFFQLIVEEIFNPAFGMFIQQEE 692
            .|:....  .:::|.|..:..:.:|.:.||||:|:|..|.|:|||.|:.:|:|||.:|:| :...
Zfish  1207 HLLEGTF--NQVMAYSRKELQRNKLYITFVGEEGLDYSGPSREFFFLLSQELFNPYYGLF-EYSA 1268

  Fly   693 TNNMWFNATPF----ENGAQ-FTLIGIIIGLAIYNNVTLAVNFPMVVYRKLIGYCGTFADLSDWS 752
            .:......:|.    ||..: |...|.|:|||:.:...|...|....|:.|:......:||....
Zfish  1269 NDTYTVQISPMSAFVENHLEWFRFSGRILGLALIHQYLLDAFFTRPFYKALLRLPTDLSDLEYLD 1333

  Fly   753 PALYKSLKSMLDYQGQDMEEVFEQTFKISYSDVFGDVVQHELVPNGQDVLVGQHNKELFVNLYSD 817
            ...::||:.|.:   .|:.:|.:.||.:: .:|||.|.:.||...|.:|.|.:.||:.::.....
Zfish  1334 EEFHQSLQWMKE---NDITDVLDLTFTVN-EEVFGQVTERELKSGGTNVQVTEKNKKEYIERMVK 1394

  Fly   818 FLLNTNIEQQFNAFRKGFEMVTDESPLKLLFRPEEIEMLVCGSREFDFVELENSTVYEGGYTEKS 882
            :.:...:.||..|..:||..|.| |.|..:|...|:|:::.|:.|.|..:..|:|.|.|||.:..
Zfish  1395 WRVERGVVQQTQALVRGFYEVVD-SRLVSVFDARELELVIAGTAEIDLNDWRNNTEYRGGYHDGH 1458

  Fly   883 QYIQDFWSIVHAMPSEDKHKLLEFTTGSARVPVGGLKCL-------RLLITRHGPDSDRLPTSHT 940
            ..|:.||..|....:|.:.:||:|.||::.||..|...|       |..|.:.|..:. ||.:||
Zfish  1459 IVIRWFWGAVERFNNEQRLRLLQFVTGTSSVPYEGFTALRGSNGLRRFCIEKWGKITS-LPRAHT 1522

  Fly   941 CFNVLLLPEYSSREKLEERLMKAINYSKGFGM 972
            |||.|.||.|.|...|.|:|:.|:..:..||:
Zfish  1523 CFNRLDLPPYPSYTMLYEKLLIAVEETSTFGL 1554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166 10/53 (19%)
HECTc 620..971 CDD:238033 115/362 (32%)
HECTc 647..970 CDD:214523 106/334 (32%)
hecw1bXP_021336549.1 HECW_N 73..192 CDD:318711
C2_NEDL1-like 213..349 CDD:176073
WW 771..803 CDD:197736 6/42 (14%)
WW 952..983 CDD:197736 7/32 (22%)
HECTc 1223..1552 CDD:214523 106/335 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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