DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ube3a and smurf2

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001107898.1 Gene:smurf2 / 563633 ZFINID:ZDB-GENE-030131-1830 Length:765 Species:Danio rerio


Alignment Length:598 Identity:166/598 - (27%)
Similarity:275/598 - (45%) Gaps:110/598 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   460 ASELERP----SCRVPLEDRTEAATASGSAAV-EDDLFV------------YNSLLEPHMPKFAE 507
            |||...|    ||.|  ::.|...|.:|:|.| .||..|            |.|....|.|....
Zfish   192 ASEYSSPGRPLSCLV--DENTPIMTPNGAAGVPADDPRVQERRVRSQRHRNYMSRTHLHTPPDLP 254

  Fly   508 DQFEKEL-------------------------QVSAIDCRK--PLIPLEEFYNEALSENIQMHHD 545
            :.:|:..                         .:|.::|.:  ||.|..|..|.|......:.|:
Zfish   255 EGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELGPLPPGWEIRNTATGRVYFVDHN 319

  Fly   546 YLSYKTLAMESEIGSGHANYFSFMLYAFILTPS-----TKVDALYYDSRMRMYSERYSSLHS--- 602
              :..|...:..:.   ||..      .:|.||     ..|:| ...||.....|:..|:.|   
Zfish   320 --NRTTQFTDPRLS---ANLH------LVLNPSPNGSRAAVEA-QSSSRPGQLKEQAQSVVSPGN 372

  Fly   603 ----------------------ILNNIGQVGQEDNPRPDLKLTVRRDQLINDALIGLEMVAMSNP 645
                                  ||..  ::.|:.......::.|.|:::..::   ...|....|
Zfish   373 LPEDPECLTVPKYKRDLVQKLKILRQ--ELSQQQPQAGHCRIEVSREEIFEES---YRQVMKMRP 432

  Fly   646 KDLKKQLVVEFVGEQGIDEGGVSKEFFQLIVEEIFNPAFGMF-IQQEETNNMWFN---ATPFENG 706
            |||.|:|:|:|.||:|:|.|||::|:..|:..|:.||.:|:| ..:::...:..|   |...|:.
Zfish   433 KDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHL 497

  Fly   707 AQFTLIGIIIGLAIYNNVTLAVNFPMVVYRKLIGYCGTFADLSDWSPALYKSLKSMLDYQGQDME 771
            :.|..:|.|:|:|:::...:...|.:..|::|:|...|..|:....|.|:.||..:||   .|:.
Zfish   498 SYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILD---NDIT 559

  Fly   772 EVFEQTFKISYSDVFGDVVQHELVPNGQDVLVGQHNKELFVNLYSDFLLNTNIEQQFNAFRKGFE 836
            .|.:.||.:.: :.:|:::||||.|||:.:.|.|..|:.:|.||.::.....||.||.|.:|||.
Zfish   560 GVLDHTFCVEH-NAYGEIIQHELKPNGKSIPVTQDTKKEYVRLYVNWRFLRGIEAQFLALQKGFN 623

  Fly   837 MVTDESPLKLLFRPEEIEMLVCGSREFDFVELENSTVYEGGYTEKSQYIQDFWSIVHAMPSEDKH 901
            .|..:..|| .|..:|:|::|||..:.|..:.:::|..: ..|..|..::.||..|.:...|.:.
Zfish   624 EVIPQHLLK-AFDEKELELIVCGLGKIDINDWKSNTRLK-HCTPDSNIVKWFWRAVESYDEERRA 686

  Fly   902 KLLEFTTGSARVPVGGLKCLR-----LLITRHGPD--SDRLPTSHTCFNVLLLPEYSSREKLEER 959
            :||:|.|||:|||:.|.|.|:     .|.|.|..|  ::.||.:|||||.:.:|.|.|.:||.::
Zfish   687 RLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDASTNNLPKAHTCFNRIDIPPYESYDKLYDK 751

  Fly   960 LMKAINYSKGFGM 972
            |:.||..:.||.:
Zfish   752 LLTAIEETCGFAV 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166
HECTc 620..971 CDD:238033 120/361 (33%)
HECTc 647..970 CDD:214523 114/333 (34%)
smurf2NP_001107898.1 C2_Smurf-like 13..137 CDD:176028
WW 159..188 CDD:278809
WW 252..283 CDD:197736 1/30 (3%)
WW 298..330 CDD:197736 8/33 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 341..375 8/34 (24%)
HECTc 410..762 CDD:238033 119/360 (33%)
HECTc 437..762 CDD:214523 112/330 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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