DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ube3a and Magi2

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_006535806.1 Gene:Magi2 / 50791 MGIID:1354953 Length:1414 Species:Mus musculus


Alignment Length:390 Identity:84/390 - (21%)
Similarity:119/390 - (30%) Gaps:127/390 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NGGGGGEDDQHLPGVSSASGSAAGAVGGRATPEMKRSAVRSLIKRYFHQLQS-----------GC 55
            ||...|....|  ..|..|..|..:....|.|....|.......   |.||:           |.
Mouse   871 NGRSPGSVSTH--HSSPRSDYATYSNSNHAAPSSNASPPEGFAS---HSLQTSDVVIHRKENEGF 930

  Fly    56 GNANCSNANCASSG-------KVAPMTPNEVAARALQLFSQDAQLCEAFTSEANSP--------Q 105
            |....|:.|...||       |:..:.....|.|..:|...|..|.....|..|.|        :
Mouse   931 GFVIISSLNRPESGATITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIK 995

  Fly   106 DVDM-----LSPND--SSSSSSGSSTSTITSASTTTTTSRQS---QSTPAAVVVPVSSPYLTQSV 160
            |..:     :.|.:  :|.:|:.||......|...:..::||   |.:||....||:.|    :.
Mouse   996 DAGLSVTLRIIPQEELNSPTSAPSSEKQSPMAQQHSPLAQQSPLAQPSPATPNSPVAQP----AP 1056

  Fly   161 PQ-LDIAGAEHS----------------------------------SGDSEPCTPTLAPVHSLDA 190
            || |.:.|.|:|                                  .||.....|.....||.|.
Mouse  1057 PQPLQLQGHENSYRSEVKARQDVKPDIRQPPFTDYRQPPLDYRQPPGGDYSQPPPLDYRQHSPDT 1121

  Fly   191 NSL-IALYEQCRAADSY--DRICHAIGVVFSSVDRLGKSF------IRSAE--PAASSSLQELLA 244
            ... ::.|.|.:..|.:  |....|.|..||.  |.|:.:      :|.||  ||..:....:  
Mouse  1122 RQYPLSDYRQPQDFDYFTVDMEKGAKGFGFSI--RGGREYKMDLYVLRLAEDGPAIRNGRMRV-- 1182

  Fly   245 NSPGALNKEQLRTLEGEHDKD---------------------EDSTQQVDEQSE----SAANATA 284
                   .:|:..:.||..:|                     :..|.||.|..|    |||.|.|
Mouse  1183 -------GDQIIEINGESTRDMTHARAIELIKSGGRRVRLLLKRGTGQVPEYDEPHAWSAAAAAA 1240

  Fly   285  284
            Mouse  1241  1240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166 14/71 (20%)
HECTc 620..971 CDD:238033
HECTc 647..970 CDD:214523
Magi2XP_006535806.1 PDZ_signaling 22..96 CDD:238492
NK 118..290 CDD:388413
WW 303..332 CDD:366073
WW 349..378 CDD:366073
PDZ 427..508 CDD:214570
PDZ 601..682 CDD:214570
MAGI_u5 681..755 CDD:374709
PDZ 774..860 CDD:214570
PDZ_signaling 919..1006 CDD:238492 16/86 (19%)
PDZ_signaling 1138..1218 CDD:238492 16/90 (18%)
MAGI_u1 1245..1285 CDD:374706
PHA03307 <1255..>1407 CDD:223039
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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