DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ube3a and ube3a

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_012812141.1 Gene:ube3a / 407881 XenbaseID:XB-GENE-948557 Length:908 Species:Xenopus tropicalis


Alignment Length:991 Identity:403/991 - (40%)
Similarity:565/991 - (57%) Gaps:187/991 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 MKRSAVRSLIKRYFHQLQSGCGNANCSNANCASSGKVAPMTPNEVAARALQLFSQDAQLCEAFTS 99
            |||:|.:.||:||:|||..||||..|:|..|||......|..|..|.:||:|:..:|:||     
 Frog    53 MKRAAAKHLIERYYHQLTEGCGNETCTNEFCASCPTFLRMDNNAAAIKALELYKVNAKLC----- 112

  Fly   100 EANSPQDVDMLSPNDSSSSSSGSSTSTI----TSASTTTTTSRQSQSTPAAVVVPVSSPYLTQSV 160
                          |...|..|:|:|.:    .||...:.|.|:                    :
 Frog   113 --------------DPHPSKKGTSSSYLENNSKSAHNNSCTERK--------------------M 143

  Fly   161 PQLDIAGAEHSSGDSEPCTPTLAPVHSLDANSLIALYEQCRAADSYDRICHAIGVVFSSVDRLGK 225
            .:.|:.|......|          |..|....:..:.|.||..:.|..:...||.||||.:.|.:
 Frog   144 NKKDLHGPRDDFKD----------VTFLSEEKVYEILELCREKEDYSPLIRVIGRVFSSAEALVQ 198

  Fly   226 SFIRSAEPAASSSLQELLANSPGALNKEQLRTLEGEHDKDEDSTQQVDEQSESAANATATAESVE 290
            ||.::...                 .||:|::|:   :||||..:  ||:.::|::|.|.     
 Frog   199 SFRKAKHH-----------------TKEELKSLQ---EKDEDKDE--DEKEKAASSAAAM----- 236

  Fly   291 SEAEPEEEDDDVCSSQSSD---------------TLVDLPGLRRV-QRLLFGCQIRAITEKLTSS 339
                  |||....||:.||               ..:|:..:||| .|||..   ..|.....::
 Frog   237 ------EEDSGASSSRLSDNSQGDNNIQKLGPEEVSLDIEAVRRVYHRLLSN---EKIETAFLNA 292

  Fly   340 VIQLSDWV--------IYMRTDWERVIHCLVICFDLATNTNNSVVDMDYLDRVLPKLCQAASAMP 396
            ::.||..|        :|.|.  ...::..:|..:     |.::...:||:..||..|:|.|.:|
 Frog   293 LVYLSPNVECDLTYHNVYSRD--PNYLNLFIIVME-----NGNLHSPEYLEMALPLFCKAMSKLP 350

  Fly   397 VPAQARLARIWAAHCSDQLHSLIAACQQQITLQVLLDEESMR----ENESIISVTKVLKIVFYAN 457
            :.|||:|.|:|:.:.::|:..::...||.||.:|:.:|.:.|    ::::|::.||.||:|:|:|
 Frog   351 LAAQAKLIRLWSKYSAEQIRRMMETFQQLITYKVISNEFNSRNLVNDDDAIVAATKCLKMVYYSN 415

  Fly   458 ILASELERPSCRVPLEDRTEAATASGSAAVEDDLFVYNSLLEPHMPKFAE--------------- 507
            ::..|:|        .|..|.         |||        || :|:.:|               
 Frog   416 VVGGEIE--------TDHNEE---------EDD--------EP-VPESSELTLQELLGEERRNKK 454

  Fly   508 ----DQFEKELQVSAIDCRKPLIPLEEFYNEALSENIQMHHDYLSYKTLAMESEIGSGHANYFSF 568
                |..|.||.|.:|||||||||.|||.||.|::.::|..||..:|   :|:|      |.|||
 Frog   455 GPRVDPLETELGVKSIDCRKPLIPFEEFVNEPLNDVLEMDKDYTFFK---VETE------NKFSF 510

  Fly   569 MLYAFILTPSTKVDALYYDSRMRMYSE-RYSSLHSILNNIGQVGQEDNPRPDLKLTVRRDQLIND 632
            |...|||...||...||||:|:||||| |.:.|:|::.     ||:.||.  |:|.||||.:|:|
 Frog   511 MTCPFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQ-----GQQLNPY--LRLKVRRDHIIDD 568

  Fly   633 ALIGLEMVAMSNPKDLKKQLVVEFVGEQGIDEGGVSKEFFQLIVEEIFNPAFGMFIQQEETNNMW 697
            ||:.|||:||.||.||||||.|||.||||:||||||||||||:|||||||..|||...|.|.:.|
 Frog   569 ALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDESTKHSW 633

  Fly   698 FNATPFENGAQFTLIGIIIGLAIYNNVTLAVNFPMVVYRKLIGYCGTFADLSDWSPALYKSLKSM 762
            ||.:.||...|||||||::|||||||..|.|:|||||||||:|..|||.||:|..|.||:|||.:
 Frog   634 FNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLADSHPVLYQSLKEL 698

  Fly   763 LDYQGQDMEEVFEQTFKISYSDVFGDVVQHELVPNGQDVLVGQHNKELFVNLYSDFLLNTNIEQQ 827
            |:|:| ::||....||:||.:|:||:.:.|:|..||..:.:...|::.||:||:|::||.::|:|
 Frog   699 LEYEG-NVEEDMMMTFQISQTDLFGNPLMHDLKENGDKIPITNENRKEFVSLYTDYILNKSVEKQ 762

  Fly   828 FNAFRKGFEMVTDESPLKLLFRPEEIEMLVCGSREFDFVELENSTVYEGGYTEKSQYIQDFWSIV 892
            |.|||:||.|||:|||||.||||||||:|:||||..||..|:::|.|:||||..|..|::||.||
 Frog   763 FKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALKDTTEYDGGYTRDSNIIKEFWEIV 827

  Fly   893 HAMPSEDKHKLLEFTTGSARVPVGGLKCLRLLITRHGPDSDRLPTSHTCFNVLLLPEYSSREKLE 957
            ::...|.|...|:||||:.|.|||||..|:::|.::|||:|||||||||||||||||||::|||:
 Frog   828 NSFTEEQKRLFLQFTTGTDRAPVGGLGKLKMIIAKNGPDTDRLPTSHTCFNVLLLPEYSNKEKLK 892

  Fly   958 ERLMKAINYSKGFGML 973
            |||:|||.|:||||||
 Frog   893 ERLLKAITYAKGFGML 908

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166 23/53 (43%)
HECTc 620..971 CDD:238033 214/350 (61%)
HECTc 647..970 CDD:214523 196/322 (61%)
ube3aXP_012812141.1 AZUL 58..112 CDD:374628 23/53 (43%)
HECTc 556..906 CDD:238033 214/350 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 372 1.000 Domainoid score I886
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7988
Inparanoid 1 1.050 655 1.000 Inparanoid score I772
OMA 1 1.010 - - QHG47992
OrthoDB 1 1.010 - - D276447at33208
OrthoFinder 1 1.000 - - FOG0008299
OrthoInspector 1 1.000 - - oto105043
Panther 1 1.100 - - LDO PTHR45622
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5642
SonicParanoid 1 1.000 - - X6282
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

Return to query results.
Submit another query.