DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ube3a and Magi

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster


Alignment Length:614 Identity:108/614 - (17%)
Similarity:180/614 - (29%) Gaps:274/614 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 SQSTPAAVVVPVSSPYLTQSVPQLDIAGAEHSSGDSEPCTPTLAPVHSLDANSLIALYEQCRAAD 204
            ||:||.||.:..:.|                    ..|...|||.::.:                
  Fly   666 SQTTPTAVKIQRTPP--------------------DPPANNTLAQLNQV---------------- 694

  Fly   205 SYDRICHAIGVVFSSVDRLGKSFI-----RSAEPAA---SSSLQELLANSPGALNKEQLRTLEGE 261
                         .:|.:|.|:|:     ||..|.|   |:.::|:|...|    |..|......
  Fly   695 -------------GNVAKLRKNFVGSGLFRSKTPTADLYSTQVKEVLPMRP----KTPLVDTRRS 742

  Fly   262 HDKDEDSTQQVDEQSESAANATATAESVESEAEPEEEDDDVCSSQSSDTLVDLPGLRRVQRLLFG 326
            ..:.:....:||::.:.||.|         |.:|.:......|:.|...|.|:|.:....:    
  Fly   743 RVQIQSPNNEVDDEGDGAAAA---------ERKPLQLQTQGKSNSSLQELDDIPYMDPYPK---- 794

  Fly   327 CQIRAITEKLTSSVIQLSDWVIYMRTDWERVIHCLVICFDLATNTNNSVVDMDYLDRVLPKLCQA 391
              |..::|:|....:|                          .:.|..:..|.      |.:   
  Fly   795 --ISRLSERLAEVTLQ--------------------------GDANGGIYGMP------PSM--- 822

  Fly   392 ASAMPVPAQARLARIWAAHCSDQLHSLIAACQQQITLQVLLDEESMRENESIISVTKVLKIVFYA 456
             ..:|:|    ||...:.:|.|        ||.|                               
  Fly   823 -QPLPLP----LAHHESCYCYD--------CQAQ------------------------------- 843

  Fly   457 NILASELERPSCRVPLEDRTEAATASGSAAVEDDLFVYNSLLEPHMPKFAEDQFEKELQVSAIDC 521
                  ..||...|    :.:.|..||:..      .|:.|...|:      |.|:         
  Fly   844 ------RYRPGYFV----QAQQAAMSGTTG------QYSPLQTAHL------QNER--------- 877

  Fly   522 RKPLIPLEEFYNEALSE-------NI----QMHHD-------YLSYKTLAMESEIGSGHANYFSF 568
                  ::...||.||:       |:    ||.|.       .|.....|.:.|           
  Fly   878 ------IQRRVNELLSDRRRVGFANLDPPQQMQHSPSWRNGALLDVSEDADQCE----------- 925

  Fly   569 MLYAFILTPST-KVDALYYDSRMRMYSERYSSLHSILNNIGQV---GQEDNPRPDLKLTVRRDQL 629
                  ||..| :..||.:..|:...:|..|.:     .:|.:   |..|           :||.
  Fly   926 ------LTEVTLERQALGFGFRIVGGTEEGSQV-----TVGHIVPGGAAD-----------QDQR 968

  Fly   630 IN--DALIGLEMVAMSNPKDLKKQLVVEFVGEQG----------------IDEGGVSKEF----F 672
            ||  |.::.::.:.:.|....|   ||..|||..                :.:..||.:.    :
  Fly   969 INTGDEILSIDGINVLNSSHHK---VVSLVGESALRGQVTMILRRRRTPLLQQAPVSTQLRRYPY 1030

  Fly   673 QLIVEEIFNPAFGMFIQQEETNNMWFNAT 701
            .:||....|..||..|  ..::|.::.:|
  Fly  1031 DVIVSRHENEGFGFVI--ISSSNHYYGST 1057

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166
HECTc 620..971 CDD:238033 22/104 (21%)
HECTc 647..970 CDD:214523 16/75 (21%)
MagiNP_001286661.1 WW 294..323 CDD:278809
WW 342..372 CDD:238122
PDZ 443..534 CDD:214570
DegQ <455..534 CDD:223343
PDZ_signaling 606..668 CDD:238492 1/1 (100%)
PDZ 925..1011 CDD:214570 24/121 (20%)
PDZ_signaling 1029..1110 CDD:238492 8/31 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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