DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ube3a and Hace1

DIOPT Version :10

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_006256657.1 Gene:Hace1 / 361866 RGDID:1306114 Length:916 Species:Rattus norvegicus


Alignment Length:1026 Identity:233/1026 - (22%)
Similarity:388/1026 - (37%) Gaps:271/1026 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 IKRYFHQLQSGCGNANC--------SNANCASSGKVAPMTPNEVAAR--------ALQLFSQDAQ 92
            :||....:.:.||:..|        :|.|...   ::..||..:|||        .|..:|.|..
  Rat    64 VKRSLLHIAANCGSVECLVLLLKKGANPNYQD---ISGCTPLHLAARNGQKKCMSKLLEYSADVN 125

  Fly    93 LC-----------------EAFTSEANSPQDVDMLSPNDSSSSSSGSSTSTITSASTTTTTSRQS 140
            :|                 |..........|||:       ..:.|.:...:...:...||.:..
  Rat   126 ICNNEGLTAIHWLAVNGRTELLHDLVQHVTDVDV-------EDAMGQTALHVACQNGHKTTVQCL 183

  Fly   141 QSTPAAVVVPVSSPYLTQSVPQLDIAGA-------EHSSGDSEPCTPTLAPVHSLDANSLIALYE 198
            ..:.|.:..|             ::|||       .|...|:..........:..|.|.:..| :
  Rat   184 LDSGADINRP-------------NVAGATPLYFACSHGQRDTAQILLLRGAKYLPDKNGVTPL-D 234

  Fly   199 QCRAADSYDRICHAIGVVFSSVDRLGKSFIRSA--EPAASSSLQELLANSPGALNKEQLRTLEGE 261
            .| ....|.:.|.   |:.....||.::.::..  |....:.|:::|                  
  Rat   235 LC-VQGGYGQTCE---VLIQYHPRLFQTIVQMTQNEDLRENMLRQVL------------------ 277

  Fly   262 HDKDEDSTQQVDEQSES---------AANATATAESVESEAEPEEEDDDVCSSQSSDTLVDLPGL 317
                    |.:.:||||         |..||.....:.|...       :.||.||.....:..|
  Rat   278 --------QHLSQQSESQYLKILTGLAEVATTNGHKLLSVFR-------LVSSLSSSYEAQMKSL 327

  Fly   318 RRVQRLLFGCQIRAITEKLTSSVIQLSDWVIYMRTDWERVIHCLVICFDLATNTNNSVVDMDYLD 382
            .|:.|:.  |.:                                   |.:..::.::.:||.|..
  Rat   328 LRIVRIF--CHV-----------------------------------FRIGPSSPSNGMDMGYNG 355

  Fly   383 RVLPKLCQAASAMPVPAQARLARIWAAHCSDQLHSLIAA-------CQQQITLQVLLDEESMREN 440
            ...|:     |.:..|    |..:|  |..|:...|||.       ....|| .:||.::...:.
  Rat   356 NKTPR-----SQVFKP----LELLW--HSLDEWLVLIATELMKNKEDSADIT-SILLKQKGQDQE 408

  Fly   441 ESIISVTKVLKIVFY-----------ANILASELERPS-CRVPLEDRTEAATASGSAAVEDDLFV 493
            .|.||..:......|           .::||.:.|..: |:..:     :.||:..:||....::
  Rat   409 ASCISAFEPPGPGSYERLSTGPGESKPDVLAGKQEASADCQDVI-----SVTANRLSAVIQAFYM 468

  Fly   494 YNSL-LEPHM--PKFAEDQFEKELQVSAIDCRKPLIPLEEFYNEALSENIQMHHDYLSYKTLAME 555
            ..|. :.|.|  |:|.|...:.:..:.....|.|.|..:.|:                       
  Rat   469 CCSCQMPPGMTSPRFIEFVCKHDEVLKCFVNRNPKIIFDHFH----------------------- 510

  Fly   556 SEIGSGHANYFSFMLYAFILTPSTKVDALYYDSRMRMYSER----YSSLHSILNNIGQVGQEDNP 616
                             |:|.....:....:..:.:.:.:|    |..|||        ||.|:.
  Rat   511 -----------------FLLECPELMSRFMHIIKAQPFKDRCEWFYEHLHS--------GQPDSD 550

  Fly   617 ---RP----DLKLTVRRDQLINDALIGLEMVAMSNPKDLKKQLVVEFVGEQGIDEGGVSKEFFQL 674
               ||    |: |.|.||.:...:   .|:|:.:|...||:.:.|.|.||:|:.: ||.:|:|.:
  Rat   551 MVHRPVSENDI-LLVHRDSIFRSS---CEIVSKANCAKLKQGIAVRFHGEEGMGQ-GVVREWFDI 610

  Fly   675 IVEEIFNPAFGMFIQQEETNNMWFNATPFENGAQ---FTLIGIIIGLAIYNNVTLAVNFPMVVYR 736
            :..||.||.:.:|.|..:......|:..:.|...   |...|.|:|||:.:...:.:.|....|:
  Rat   611 LSNEIVNPDYALFTQSADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYK 675

  Fly   737 KLIGYCGTFADLSDWSPALYKSLKSMLDYQGQDMEEVFEQTFKISYSDVFGDVVQHELVPNGQDV 801
            .::|....:.|::...|...|:|:.:||....|:.  .|.||.:. :||||.:.:..|.|.|..:
  Rat   676 HILGIPVNYQDVASIDPEYAKNLQWILDNDISDLG--LELTFSVE-TDVFGAMEEVPLKPGGGSI 737

  Fly   802 LVGQHNKELFVNLYSDFLLNTNIEQQFNAFRKGFEMVTDESPLKLLFRPEEIEMLVCGSREFDFV 866
            ||.|:||..:|.|.::..:...|:.|.|||.:||.|....|.:: ||...|:|:|:.|..|.|..
  Rat   738 LVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQ-LFDEYELELLLSGMPEIDVN 801

  Fly   867 ELENSTVYEGGYTEKSQYIQDFWSIVHAMPSEDKHKLLEFTTGSARVPVG---------GLKCLR 922
            :...:|.|..||..:...||.||.:|..|..|::..||:|.|||:|||.|         ||:...
  Rat   802 DWIKNTEYTSGYEREDPVIQWFWEVVEDMTQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFT 866

  Fly   923 LLITRHGPDSDRLPTSHTCFNVLLLPEYSSREKLEERLMKAINY-SKGFGM 972
            :....:.|  :.||||.||.|:|.||||.|:|.|::||:.|::. |.|:.|
  Rat   867 IAAVPYTP--NLLPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGYTM 915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:465173 15/65 (23%)
HECTc 620..971 CDD:238033 120/363 (33%)
Hace1XP_006256657.1 ANKYR 26..249 CDD:440430 37/212 (17%)
ANK repeat 66..95 CDD:293786 6/28 (21%)
ANK repeat 97..128 CDD:293786 8/30 (27%)
ANK repeat 130..161 CDD:293786 4/37 (11%)
ANK repeat 163..194 CDD:293786 5/43 (12%)
ANK repeat 196..221 CDD:293786 5/24 (21%)
HECTc 561..910 CDD:238033 118/359 (33%)

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