DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ube3a and Ube3a

DIOPT Version :9

Sequence 1:NP_648452.1 Gene:Ube3a / 39266 FlyBaseID:FBgn0061469 Length:973 Species:Drosophila melanogaster
Sequence 2:NP_001178766.1 Gene:Ube3a / 361585 RGDID:1306361 Length:868 Species:Rattus norvegicus


Alignment Length:975 Identity:393/975 - (40%)
Similarity:555/975 - (56%) Gaps:164/975 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 MKRSAVRSLIKRYFHQLQSGCGNANCSNANCASSGKVAPMTPNEVAARALQLFSQDAQLCEAFTS 99
            |||:|.:.||:||:|||..||||..|:|..|||......|..|..|.:||:|:..:|:||     
  Rat    22 MKRAAAKHLIERYYHQLTEGCGNEACTNEFCASCPTFLRMDNNAAAIKALELYKINAKLC----- 81

  Fly   100 EANSPQDVDMLSPNDSSSSSSGSSTSTITSASTTTTTSRQSQSTPAAVVVPVSSPYLTQSVPQLD 164
                          |...|..|:                             ||.||..|     
  Rat    82 --------------DPHPSKKGA-----------------------------SSAYLENS----- 98

  Fly   165 IAGAEHSSGDSEPCTPTLAPVHSLDANSLIALYEQCRAADSYDRICHAIGVVFSSVDRLGKSFIR 229
             .||.::|............|..|....:..:||.||..:.|..:...||.:|||.:.|.:||.:
  Rat    99 -KGASNNSEIKMNKKEEFKEVDYLTEEKVYEIYEFCREREDYSPLIRVIGRIFSSAEALVQSFRK 162

  Fly   230 SAEPAASSSLQELLANSPGALNKEQLRTLEGEHDKDEDSTQQVDEQSESAANATATAESVESEA- 293
            ..:.                 .||:|::|:   :||||..:  ||:.::|.:|.|..|..|:.: 
  Rat   163 VKQH-----------------TKEELKSLQ---EKDEDKDE--DEKEKAACSAAAMEEDSEASSS 205

  Fly   294 ---EPEEEDDDVCSSQSSDTLVDLPGLRRVQRLLFGCQIRAITEKLTSSVIQLSDWV-------- 347
               :..:.|::|......|..||:..:|||...|...:  .|.....::::.||..|        
  Rat   206 RMGDSSQGDNNVQKLGPDDVTVDIDAIRRVYSSLLSDE--KIETAFLNALVYLSPNVECDLTYHN 268

  Fly   348 IYMRTDWERVIHCLVICFDLATNTNNSVVDMDYLDRVLPKLCQAASAMPVPAQARLARIWAAHCS 412
            :|.|.  ...::..:|..:     |.::...:||:..||..|:|.|.:|:.||.:|.|:|:.:.:
  Rat   269 VYTRD--PNYLNLFIIVME-----NRNLHSPEYLEMALPLFCKAMSKLPLAAQGKLIRLWSKYSA 326

  Fly   413 DQLHSLIAACQQQITLQVLLDEESMR----ENESIISVTKVLKIVFYANILASELERPSCRVPLE 473
            ||:..::...||.||.:|:.:|.:.|    ::::|::.:|.||:|:|||::..:::        .
  Rat   327 DQIRRMMETFQQLITYKVISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGDVD--------T 383

  Fly   474 DRTEAATASGSAAVEDDLFVYNSLLEPHMPKFAE-------------------DQFEKELQVSAI 519
            :..|          |||        |..:|:.:|                   |..|.|:.|..:
  Rat   384 NHNE----------EDD--------EEPIPESSELTLQELLGEERRNKKGPRVDPLETEIGVKTL 430

  Fly   520 DCRKPLIPLEEFYNEALSENIQMHHDYLSYKTLAMESEIGSGHANYFSFMLYAFILTPSTKVDAL 584
            |||||||..|||.||.|::.::|..||..:|   :|:|      |.||||...|||...||...|
  Rat   431 DCRKPLISFEEFINEPLNDVLEMDKDYTFFK---VETE------NKFSFMTCPFILNAVTKNLGL 486

  Fly   585 YYDSRMRMYSE-RYSSLHSILNNIGQVGQEDNPRPDLKLTVRRDQLINDALIGLEMVAMSNPKDL 648
            |||:|:||||| |.:.|:|::.     ||:.||.  |:|.||||.:|:|||:.|||:||.||.||
  Rat   487 YYDNRIRMYSERRITVLYSLVQ-----GQQLNPY--LRLKVRRDHIIDDALVRLEMIAMENPADL 544

  Fly   649 KKQLVVEFVGEQGIDEGGVSKEFFQLIVEEIFNPAFGMFIQQEETNNMWFNATPFENGAQFTLIG 713
            ||||.|||.||||:||||||||||||:|||||||..|||...|.|...|||.:.||...||||||
  Rat   545 KKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDEATRLFWFNPSSFETEGQFTLIG 609

  Fly   714 IIIGLAIYNNVTLAVNFPMVVYRKLIGYCGTFADLSDWSPALYKSLKSMLDYQGQDMEEVFEQTF 778
            |::|||||||..|.|:|||||||||:|..|||.||.|..|.||:|||.:|:|:| ::|:....||
  Rat   610 IVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFCDLGDSHPILYQSLKDLLEYEG-NVEDDMMITF 673

  Fly   779 KISYSDVFGDVVQHELVPNGQDVLVGQHNKELFVNLYSDFLLNTNIEQQFNAFRKGFEMVTDESP 843
            :||.:|:||:.:.::|..||..:.:...|::.||:||||::||.::|:||.|||:||.|||:|||
  Rat   674 QISQTDLFGNPMMYDLKENGDKIPITNENRKEFVSLYSDYILNKSVEKQFKAFRRGFHMVTNESP 738

  Fly   844 LKLLFRPEEIEMLVCGSREFDFVELENSTVYEGGYTEKSQYIQDFWSIVHAMPSEDKHKLLEFTT 908
            ||.||||||||:|:||||..||..||.:|.|:||||.:|..|::||.|||:...|.|...|:|||
  Rat   739 LKYLFRPEEIELLICGSRNLDFQALEETTEYDGGYTRESVVIREFWEIVHSFTDEQKRLFLQFTT 803

  Fly   909 GSARVPVGGLKCLRLLITRHGPDSDRLPTSHTCFNVLLLPEYSSREKLEERLMKAINYSKGFGML 973
            |:.|.|||||..|:::|.::|||::|||||||||||||||||||:|||:|||:|||.|:||||||
  Rat   804 GTDRAPVGGLGKLKMIIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYAKGFGML 868

  Fly   974  973
              Rat   869  868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ube3aNP_648452.1 AZUL 40..94 CDD:293166 23/53 (43%)
HECTc 620..971 CDD:238033 215/350 (61%)
HECTc 647..970 CDD:214523 197/322 (61%)
Ube3aNP_001178766.1 AZUL 27..81 CDD:406862 23/53 (43%)
HECTc 516..866 CDD:238033 196/350 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334499
Domainoid 1 1.000 370 1.000 Domainoid score I878
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7988
Inparanoid 1 1.050 648 1.000 Inparanoid score I767
OMA 1 1.010 - - QHG47992
OrthoDB 1 1.010 - - D276447at33208
OrthoFinder 1 1.000 - - FOG0008299
OrthoInspector 1 1.000 - - oto98349
orthoMCL 1 0.900 - - OOG6_101192
Panther 1 1.100 - - LDO PTHR45622
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6282
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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